CGDB Gene Information

Tag Content
CGDB ID CGD-DaN-031719
Ensembl Accession ENSDNOP00000027484.1
Protein Name PER1
Ensembl Information ENSDNOG00000031517; ENSDNOT00000039629
Organism Dasypus novemcinctus
NCBI Taxa ID 9361
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MSGPLEGADG GGDPRPGEPF CTGEAPSPGP PQHRSCPGPS LADDTDANSN GSSGNESNGH 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCAMDMSTY TLEELEHITS EYTLRNQDTF SVAVSFLTGR IVYISEQAGV 240
LLRCKRDVFR DARFSELLAP QDVGVFYGST APSRLPTWGT GASAGSGLKD FTQEKSVFCR 300
IRGGPDRDPG PRYQPFRLTP YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF 360
TTRHTPSCLF QDVDERAAPL LGYLPQDLLG APMLLFLHPE DRPLMLAIHK KILQLAGQPF 420
DHSPIRFCAR NGEYVTMDTS WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPAL 480
SLDPDIQELS EQIHRLLLQP VHSPSPTGLC GVGPMTSPGP LLSPDSSSDS NEGDAEGPGP 540
PAPVTFQQIC KDVHLVKHQG QQLFIESRAR PPPRPRLPAT GTVKAKALPC QPLDPELEAA 600
PAPVPAPLAL VPEEAERKEA SSCSYQQINC LDSILRYLES CNIPSTTKRK CASSSSCTTS 660
SASDDDRQTA GPVPAGAKKD PSSAVLSGVG ATPRKEPVVG GTLSPLALAN KAESVVSVTS 720
QCSFSSTIVH VGDKKPPESD IVMMEDLPGL AAGPAPSPAP SPSVAPDPAP DAYRPVGLTK 780
AVLSLHTQKE EQAFLSRFRD LGRLRGLVGS STAPSAPGQR GCHHGPAPAG RRQHCRSKAK 840
RSRHHQNPRA EAPCYVSHPS PVPPSAPWPP PPATTPFPAV VQPYPLPVFS PRGGPQPLPA 900
APTSVPSAPF PPPLVTPMVA LVLPNYLFPP PSSYPYGAPQ PPAEGPPTPA SHSPSPSLPP 960
LPPSPPHRPD SPLFNSRCSS PLQLNLLQLE EPPRTEGAAV AGGPGSSAGP PPPSEEAAEL 1020
EARLVEVTES SNQDALSGSS DLLELLLQED SRSGTGSAAS GSLGSGSGSG SGSGSHEGGS 1080
TSASITRSSQ SSHTSKYFGS IDSSEAEAGA AQARAEPGDQ VIKYVLQDPI WLLMANADQR 1140
VMMTYQVPSR DMASVLKQDR ERLRAMQKQQ PRFSEDQRRE LGAVHSWVRK GQLPRALDVM 1200
ACVDCGSSTQ NPSHPDDPLF SELDGLGLEP MEEGGGEGGG GGEGGGGEGE GGGEAGAQVG 1260
ASASSSQDLA MEEEEQGGSS SSSALPVPEN STS 1293
Nucleotide Sequence
(Fasta)		 GTCCTGGCTG TGATCGAGCT TCTCAGTCCT CAGAGACTTA GGTCTCCCAC CTCACTCTCT 60
CGGCCAGGCC TGCCGGCCCC CTCGTACATC CGTGGTGGCC TCTCTGCCCT CCCTGCTCTC 120
CTGTCCTCCT CATGGCCCAG ACATGAGCGG CCCCCTAGAA GGGGCTGATG GGGGAGGGGA 180
CCCCAGGCCC GGGGAACCCT TTTGTACTGG AGAGGCCCCA TCCCCTGGGC CCCCACAGCA 240
CCGGTCTTGT CCAGGCCCCA GCCTGGCCGA TGACACCGAT GCCAACAGCA ATGGCTCAAG 300
CGGCAATGAG TCCAATGGCC ACGAGTCCAG GGGTGCATCT CAGCGGAGCT CACATAGCTC 360
CTCCTCTGGC AATGGCAAGG ACTCGGCCCT GCTGGAGACG ACGGAGAGCA GCAAAAGCAC 420
AAACTCCCAG AGCCCATCCC CACCCAGCAG CTCCATCGCT TACAGCCTCC TGAGTGCCAG 480
CTCCGAGCAG GACAATCCGT CCACCAGTGG CTGCAGCAGT GAACAGTCAG CCCGGGCGAG 540
GACCCAGAAG GAACTCATGA CGGCACTGAG GGAGCTCAAG CTTCGGCTGC CGCCAGAGCG 600
CCGGGGCAAG GGCCGCTCTG GGACCCTGGC CACGCTCCAG TATGCGCTGG CCTGTGTCAA 660
GCAGGTGCAG GCCAACCAGG AGTACTACCA GCAGTGGAGC CTGGAGGAGG GAGAGCCCTG 720
TGCCATGGAC ATGTCCACTT ACACCCTGGA GGAGCTGGAA CACATCACAT CTGAGTACAC 780
GCTGCGCAAC CAGGATACCT TCTCGGTGGC CGTCTCCTTC CTGACGGGCC GCATCGTCTA 840
CATCTCGGAG CAGGCGGGTG TGCTGCTGCG CTGCAAGCGG GACGTGTTCC GGGACGCCCG 900
CTTCTCAGAG CTCCTGGCTC CCCAGGACGT GGGCGTCTTC TATGGCTCCA CTGCCCCGTC 960
CCGCCTGCCC ACCTGGGGCA CCGGGGCCTC AGCAGGTTCA GGCCTCAAGG ACTTCACCCA 1020
GGAGAAGTCT GTCTTCTGCC GTATCAGAGG AGGTCCTGAC CGGGATCCAG GGCCTCGGTA 1080
CCAGCCATTC CGCCTAACCC CGTATGTGAC CAAGATCCGG GTCTCAGATG GGGCCCCCGC 1140
CCAGCCGTGC TGCCTGCTCA TCGCAGAGCG CATCCACTCG GGTTACGAAG CTCCCCGGAT 1200
CCCTCCCGAC AAGAGGATTT TTACCACGCG GCACACACCC AGTTGCCTCT TCCAGGACGT 1260
GGATGAGAGG GCCGCCCCAC TGCTGGGCTA CTTGCCCCAG GACCTCCTGG GTGCCCCCAT 1320
GCTCCTCTTC TTGCACCCCG AGGACCGACC CCTCATGCTG GCCATCCACA AGAAGATCCT 1380
GCAGCTGGCG GGCCAGCCCT TTGACCACTC CCCGATCCGC TTCTGTGCCC GCAATGGGGA 1440
GTACGTCACC ATGGACACCA GCTGGGCCGG CTTCGTGCAC CCCTGGAGTC GCAAGGTGGC 1500
CTTTGTGTTG GGTCGCCATA AAGTGCGCAC GGCACCCCTG AATGAGGACG TGTTCACTCC 1560
TCCGGCTCCC AGCCCAGCTC TGTCCCTGGA CCCTGACATC CAGGAGCTGT CCGAGCAGAT 1620
CCACAGGCTG CTGTTACAGC CTGTGCACAG CCCCAGCCCC ACAGGGCTTT GTGGAGTCGG 1680
CCCCATGACG TCCCCAGGTC CTCTCCTCAG CCCCGACTCC TCCAGTGACA GCAACGAGGG 1740
AGATGCTGAG GGGCCTGGAC CTCCGGCCCC GGTGACCTTC CAGCAGATCT GTAAGGACGT 1800
GCATCTGGTG AAGCACCAGG GGCAGCAGCT TTTCATTGAG TCCCGGGCAC GGCCCCCGCC 1860
CCGGCCCCGC CTCCCTGCTA CAGGCACAGT CAAGGCCAAG GCCCTTCCCT GCCAGCCCCT 1920
GGACCCAGAG CTGGAGGCGG CCCCTGCCCC AGTCCCGGCT CCACTAGCCT TGGTCCCTGA 1980
GGAGGCTGAG AGGAAAGAAG CCTCCAGCTG TTCCTACCAG CAGATCAATT GTCTGGACAG 2040
CATCCTCAGG TACCTGGAGA GCTGCAACAT CCCCAGCACG ACCAAGCGCA AGTGTGCCTC 2100
CTCCTCCTCC TGCACCACCT CCTCGGCCTC TGACGACGAC AGGCAGACGG CAGGTCCAGT 2160
GCCTGCGGGG GCCAAGAAAG ATCCATCGTC GGCAGTGCTG TCTGGGGTGG GGGCCACCCC 2220
GCGGAAGGAG CCGGTGGTGG GAGGCACCCT GAGCCCGCTC GCCCTGGCCA ATAAGGCAGA 2280
GAGCGTGGTG TCCGTCACCA GTCAGTGTAG CTTCAGCTCC ACCATCGTCC ATGTGGGAGA 2340
CAAGAAGCCC CCGGAGTCGG ACATCGTCAT GATGGAGGAC CTGCCTGGCC TGGCCGCGGG 2400
CCCGGCCCCC AGCCCGGCCC CTAGCCCCTC GGTCGCTCCT GACCCAGCCC CAGATGCCTA 2460
CCGCCCCGTG GGCCTGACCA AGGCCGTGCT GTCTCTGCAC ACCCAGAAGG AGGAGCAGGC 2520
CTTCCTTAGC CGCTTCCGCG ACCTGGGCAG GCTGCGTGGA CTCGTCGGCT CCTCCACGGC 2580
CCCCTCGGCC CCTGGCCAGC GAGGCTGCCA CCATGGCCCC GCGCCCGCCG GCCGCCGCCA 2640
ACACTGCCGA TCCAAAGCCA AGCGCTCACG CCACCACCAG AACCCTCGGG CCGAAGCCCC 2700
CTGCTATGTC TCCCACCCCT CGCCTGTGCC ACCCTCTGCC CCCTGGCCCC CCCCACCAGC 2760
CACCACCCCC TTCCCAGCTG TGGTCCAGCC CTACCCCCTT CCAGTATTCT CCCCCCGAGG 2820
AGGCCCCCAG CCTCTCCCCG CTGCCCCTAC CTCTGTGCCC TCTGCACCTT TTCCTCCCCC 2880
CCTGGTGACC CCCATGGTGG CCTTGGTGCT CCCTAACTAT TTGTTCCCTC CCCCATCCAG 2940
CTATCCCTAC GGGGCACCCC AGCCCCCCGC TGAGGGGCCT CCCACCCCTG CCTCCCACTC 3000
CCCTTCCCCA TCCCTGCCTC CACTGCCCCC CAGCCCACCC CACCGCCCGG ATTCTCCACT 3060
GTTCAACTCA AGATGCAGCT CCCCTCTCCA GCTAAATCTG CTGCAGCTTG AGGAGCCCCC 3120
CCGTACTGAG GGGGCTGCTG TTGCCGGGGG CCCTGGGAGC AGTGCCGGGC CCCCTCCTCC 3180
CAGTGAGGAG GCTGCTGAGC TGGAGGCCAG ACTGGTGGAA GTGACCGAGT CCTCCAATCA 3240
GGATGCTCTG TCGGGCTCCA GTGACCTGCT GGAGCTGCTG CTGCAAGAGG ACTCCCGCTC 3300
TGGCACCGGC TCTGCCGCCT CAGGCTCCCT GGGCTCAGGC TCAGGCTCTG GGTCTGGCTC 3360
GGGCTCCCAC GAGGGGGGCA GTACATCAGC TAGCATCACG CGCAGCAGTC AGAGCAGCCA 3420
CACAAGCAAG TACTTTGGCA GCATCGACTC ATCGGAGGCT GAGGCCGGGG CTGCCCAGGC 3480
TAGGGCGGAG CCCGGGGACC AGGTCATTAA GTATGTGCTC CAGGACCCAA TCTGGCTGCT 3540
CATGGCCAAC GCCGACCAGC GGGTCATGAT GACCTACCAG GTGCCCTCCA GGGACATGGC 3600
CTCTGTGCTG AAGCAGGACC GGGAGCGGCT CCGGGCCATG CAGAAGCAGC AGCCTCGGTT 3660
CTCGGAAGAC CAGAGGAGGG AACTGGGTGC TGTGCACTCC TGGGTGCGAA AGGGCCAGCT 3720
GCCTCGGGCC CTGGATGTGA TGGCCTGTGT GGACTGCGGT AGCAGCACCC AGAATCCCAG 3780
CCACCCCGAT GACCCACTCT TCTCGGAGCT GGATGGACTG GGGCTGGAGC CCATGGAAGA 3840
GGGCGGAGGC GAGGGTGGCG GCGGTGGTGA GGGAGGAGGA GGTGAGGGTG AGGGAGGCGG 3900
AGAGGCCGGG GCGCAAGTTG GGGCCAGTGC CTCGAGCTCT CAGGACCTGG CCATGGAGGA 3960
GGAGGAACAA GGTGGGAGCT CATCCAGTTC AGCCTTACCT GTCCCAGAAA ACAGCACCAG 4020
CTAGACTCCA TTTGGGGCCC ATCTGTGGGA GGCCGGAGAG GCTTCCTTTC CCCATGTCCC 4080
AACTCTCAGA ACTCAGTCGT GGCCGGACCA ATCAATAGGA AACTGCCCCA GCTTCTCCCG 4140
CTGTAGGGGG CTGGACCCCC ATCACCAGCC CAGGATCCAG GGGCTGCCTC CTGGCCTCTT 4200
AGGGAATAGA GACACAGAAC TCCTCAGCCC AGCCTCGAGG AGCCTTCCCC CGCTCCCCCT 4260
AGCGAGGAGT CTCGCTCCCC TGGACAAGGT TGCTGACAAG CTGCTGAAGT GTCACTGAAT 4320
CCAGCTGAGC CGAGGCCCGG TCCCTGAGGA TTGGGGCTGC ACTTATTTTT GGGGGGAGAC 4380
AGCCCTCTCT CCCACCTCCT CCCCACAAGC CGGATGGGAG GAGGAGGGCC TGAGGCCCAC 4440
GCAGGGCCCT GGGGTCTGGA CCCCTAGCTG CTCCAGGGTG GGGGAGGTTG GTGGACCATG 4500
GAGTCCCTGG TGCTGCCCCT CAGGTGGGAC CCAGGTGTTC TCAGCTGTAC CCTCTACCGA 4560
TGGCATTTGT GTTTTTGATA TTGTGTCTGT TATTATTTTT TTTAATACAA GAAGGAAAAA 4620
AGACAACAGG ACTCTGTGGA ATGAAATTTG GGATTTGGGT TAGGAGAGCT CTATGGAGCC 4680
ACAGGGAAGT GTGGATCCAC TTCCAGGAAT TCCTGTTGTG AGAATGGGCA ACTCCACCCC 4740
ACCCGCACCC CTCGGGGCCC CACCCCTCTT CTCCCCACAT CCTTTCCATG GCCTTGCTGA 4800
GCCTGCTATG CTAAATCTGT ACCTGACAAA CTGCTCTCAT CCCTAACAGT CCCTTGGCTG 4860
GGTTTATCCT GGGAAGGAGA GATGAGAGGT GCCTTGTGGC CAAGAGCCTG GGGGAGCCCC 4920
CACCATGGGT CGTGGGTGGC CTAGGGAGGG GAAAGTCCAC AATCCGTGGT GCCTGGAGGC 4980
AGTTGGAGGG TGTTGAACTT CGTTGCCATA CAGGGGAGGG CTCTTAGGTC AGTGCAGGTG 5040
GTTAAGGGAC AGAGTCATGG CACCCATTCT TGGTCGTGTT GGCTTCCGAA AGTATGGGAG 5100
AGGGGAGGGA CGGAGCGGGT GGAATTTGTT AGTTCTCCAG AACCTAGGA 5149
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans27.82 5.30e-13 74.33
CGD-EqC-020994Equus caballus60.85 0.00e+00 1443.7
CGD-GaM-021007Gadus morhua52.57 4.00e-177 619
CGD-HoS-021038Homo sapiens (Human)64.09 0.00e+00 1490.3
CGD-OvA-022197Ovis aries62.69 0.00e+00 1433.3
CGD-RaN-021793Rattus norvegicus63.53 0.00e+00 1459.1
Gene Ontology

GO:0005737--cytoplasm
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0031625--ubiquitin protein ligase binding
GO:0007623--circadian rhythm
GO:0043967--histone H4 acetylation
GO:0032922--circadian regulation of gene expression
GO:0042634--regulation of hair cycle
GO:0070888--E-box binding
GO:0019900--kinase binding
GO:0043966--histone H3 acetylation
GO:0005634--nucleus
GO:0005515--protein binding
GO:0045944--positive regulation of transcription from RNA polymerase II promoter
GO:0008134--transcription factor binding
GO:0045892--negative regulation of transcription, DNA-templated
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0000989--transcription factor activity, transcription factor binding
GO:0010608--posttranscriptional regulation of gene expression
GO:0070932--histone H3 deacetylation
GO:0051591--response to cAMP
GO:0000976--transcription regulatory region sequence-specific DNA binding
GO:0031490--chromatin DNA binding
GO:0002028--regulation of sodium ion transport
GO:0042752--regulation of circadian rhythm
GO:2000323--negative regulation of glucocorticoid receptor signaling pathway
GO:0009416--response to light stimulus
GO:0043153--entrainment of circadian clock by photoperiod
GO:0097167--circadian regulation of translation