CGDB Gene Information

Tag Content
CGDB ID CGD-GoG-062877
Ensembl Accession ENSGGOP00000005652.2
Protein Name PER1
Ensembl Information ENSGGOG00000005764; ENSGGOT00000005799
Organism Gorilla gorilla
NCBI Taxa ID 9595
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 19 ZT 7 LD 2 muscle Predicted from orthologs H8ZXB9
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MSGPLEGADG GGDPRPGESF CPGGIPSPGP PQHRPCPGAS LADDTDANSN GSSGNESNGH 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCSMDMSTY TLEELEHITS EYTLQNQDTF SVAVSFLTGR IVYISEQAAV 240
LLRCKRDVFR GTRFSELLAP QDVGVFYGST APSRLPTWGT GASAGSGLRD FTQEKSIFCR 300
IRGGPDRDPG PRYQPFRLTP YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF 360
TTRHTPSCLF QDVDERAAPL LGYLPQDLLG APVLLFLHPE DRPLMLAIHK KILQLAGQPF 420
DHSPIRFCAR NGEYVTMDTS WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPAP 480
SLDTDIQELS EQIHRLLLQP VHSPSPTGLC GVGPVTSPGP LHSPGSSSDS NGGDAEGPGP 540
PAPVTFQQIC KDVHLVKHQG QQLFIESRAR PQSRPRLPAT GTFKAKALPC QSPDPELEAG 600
SAPVQAPLAL VPEEAERKEA SSCSYQQINC LDSILRYLES CNLPSTTKRK CASSSSYTTS 660
SASDDDRQRT GPVSVGTKKD PPSAVLSGEG ATPRKEPVVG GTLSPLALAN KAESVVSVTS 720
QCSFSSTIVH VGDKKPPESD IIMMEDLPGL APGPAPSPAP SPTVAPDPAP DAYRPVGLTK 780
AVLSLHTQKE EQAFLSRFRD LGRLRGLDSS STAPSALGER GCHHGPAPPS RRHHCRSKAK 840
RSRHHQNPRA EAPCYVSHPS PVPPSTPWPT PPATTPFPAV VQPYPLPVFS PRGGPQPLPP 900
APTSVPPAAF PAPLVTPMVA LVLPNYLFPT PSSYPYGALQ TPAEGPPTPA SHSPSPSLPA 960
LPPSPPHRPD SPLFNSRCSS PLQLNLLQLE ELPRAEGAAV AGGPGSSAGP PPPSAEAAEP 1020
EARLAEVTES SNQDALSGSS DLLELLLQED SRSGTGSAAS GSLGSGLGSG SGSGSHEGGS 1080
TSASITRSSQ SSHTSKYFGS IDSSEAEAGA ARGGPEPGDQ VIKYVLQDPI WLLMANADQR 1140
VMMTYQVPSR DMTSVLKQDR ERLRAMQKQQ PRFSEDQRRE LGAVHSWVRK GQLPRALDVM 1200
ACVDCGSSTQ DPGHPDDPLF SELDGLGLEP MEEGGGEQGS SGGGSGEGEG CEEAQGGAKA 1260
SSSQDLAMEE EEEGRSSSSP ASPTAGNCTS
Nucleotide Sequence
(Fasta)		 CTCCCTCTCC AGGTACTGGC TGTGATCGAA CTTCTCAACC CTCAGAGACT TAGATCTTCC 60
ACCTCACTCC CTCAGCCAGG CCTCCAGGCC CCCTCGTGCA TCCGTGGTGG CCTCTCTGCC 120
TTCTCTGTTC TGTTCTCCCC ATGGCCCAGA CATGAGCGGC CCCCTAGAAG GGGCTGATGG 180
GGGAGGGGAC CCCAGGCCTG GGGAATCATT TTGTCCTGGG GGCATCCCAT CCCCTGGGCC 240
CCCACAGCAC CGGCCTTGCC CAGGCGCCAG CCTGGCCGAT GACACCGATG CCAACAGCAA 300
TGGTTCAAGC GGCAATGAGT CCAACGGGCA TGAGTCTAGA GGCGCATCTC AGCGGAGCTC 360
ACACAGCTCC TCCTCAGGCA ACGGCAAGGA CTCAGCCCTG CTGGAGACCA CTGAGAGCAG 420
CAAGAGCACA AACTCTCAGA GCCCATCCCC ACCCAGCAGT TCCATTGCCT ACAGCCTCCT 480
GAGTGCCAGC TCAGAGCAGG ACAACCCGTC CACCAGTGGC TGCAGCAGTG AACAGTCAGC 540
CCGGGCAAGG ACTCAGAAGG AACTCATGAC AGCACTTCGA GAGCTCAAGC TTCGACTGCC 600
GCCAGAGCGC CGGGGCAAGG GCCGCTCTGG GACCTTGGCC ACGCTGCAGT ACGCACTGGC 660
CTGTGTCAAG CAGGTACAAG CCAACCAGGA ATACTACCAG CAGTGGAGCC TGGAGGAGGG 720
CGAGCCTTGC TCCATGGACA TGTCCACCTA TACCCTGGAG GAGCTGGAGC ACATCACGTC 780
TGAGTACACA CTTCAGAACC AGGATACCTT CTCAGTGGCT GTCTCCTTCT TGACGGGCCG 840
AATCGTCTAC ATTTCGGAGC AGGCAGCTGT CCTGCTGCGT TGCAAGCGGG ACGTGTTCCG 900
GGGTACCCGC TTCTCTGAGC TCCTGGCTCC CCAGGATGTG GGAGTCTTCT ATGGTTCCAC 960
TGCTCCATCT CGCCTGCCCA CCTGGGGCAC AGGGGCCTCA GCAGGTTCAG GCCTCAGGGA 1020
CTTTACCCAG GAGAAGTCCA TCTTCTGCCG TATCAGAGGA GGTCCTGACC GGGATCCAGG 1080
GCCTCGGTAC CAGCCATTCC GCCTAACCCC GTATGTGACC AAGATCCGGG TCTCAGATGG 1140
GGCCCCTGCA CAGCCGTGCT GCCTGCTGAT TGCAGAGCGC ATCCATTCGG GTTACGAAGC 1200
TCCCCGGATA CCCCCTGACA AGAGGATTTT CACTACGCGG CACACACCCA GCTGCCTCTT 1260
CCAGGATGTG GATGAAAGGG CTGCCCCCCT GCTGGGCTAC CTGCCCCAGG ACCTCCTGGG 1320
GGCCCCAGTG CTCCTGTTCC TGCATCCTGA GGACCGACCC CTCATGCTGG CTATCCACAA 1380
GAAGATTCTG CAGTTGGCGG GCCAGCCCTT TGACCACTCC CCTATCCGCT TCTGTGCCCG 1440
CAACGGGGAG TATGTCACCA TGGACACCAG CTGGGCTGGC TTTGTGCACC CCTGGAGCCG 1500
CAAGGTAGCC TTCGTGTTGG GCCGCCACAA AGTACGCACG GCCCCCCTGA ATGAGGACGT 1560
GTTCACTCCC CCGGCCCCCA GCCCAGCTCC CTCCCTGGAC ACTGATATCC AGGAGCTGTC 1620
AGAGCAGATC CACCGGCTGC TGCTGCAGCC CGTGCACAGT CCCAGCCCCA CAGGACTCTG 1680
TGGAGTCGGC CCCGTGACAT CCCCAGGCCC TCTCCACAGC CCTGGGTCCT CCAGTGATAG 1740
CAACGGGGGT GATGCAGAGG GGCCTGGGCC TCCTGCGCCA GTGACTTTCC AGCAGATCTG 1800
TAAGGATGTG CATCTGGTGA AGCACCAGGG CCAGCAGCTT TTTATTGAGT CTCGGGCCCG 1860
GCCTCAGTCC CGGCCCCGCC TCCCTGCTAC GGGCACGTTC AAGGCCAAGG CCCTTCCCTG 1920
CCAATCCCCA GACCCAGAGC TGGAGGCGGG TTCTGCTCCC GTCCAGGCCC CACTAGCCTT 1980
GGTCCCTGAG GAGGCCGAGA GGAAAGAAGC CTCCAGCTGC TCCTACCAAC AGATCAACTG 2040
CCTGGACAGC ATCCTCAGGT ACCTGGAGAG CTGCAACCTC CCCAGCACCA CTAAGCGTAA 2100
ATGTGCCTCC TCCTCCTCCT ATACCACCTC CTCAGCCTCT GACGACGACA GGCAGAGGAC 2160
AGGTCCAGTC TCTGTGGGGA CCAAGAAAGA TCCGCCGTCA GCAGTGCTGT CTGGGGAGGG 2220
GGCCACCCCA CGGAAGGAGC CAGTGGTGGG AGGCACCCTG AGCCCGCTCG CCCTGGCCAA 2280
TAAGGCGGAG AGCGTGGTGT CCGTCACCAG TCAGTGTAGC TTCAGCTCCA CCATCGTCCA 2340
TGTGGGAGAC AAGAAGCCCC CGGAGTCGGA CATCATCATG ATGGAGGACC TGCCTGGCCT 2400
AGCCCCAGGC CCAGCCCCCA GCCCAGCCCC CAGCCCCACA GTAGCCCCTG ACCCAGCCCC 2460
AGACGCCTAC CGTCCAGTGG GGCTGACCAA GGCCGTGCTG TCCCTGCACA CACAGAAGGA 2520
AGAGCAAGCC TTTCTCAGCC GCTTCCGAGA CCTGGGCAGG CTGCGTGGAC TCGACAGCTC 2580
TTCCACAGCT CCCTCAGCCC TTGGCGAGCG AGGCTGCCAC CACGGCCCCG CACCCCCAAG 2640
CCGCCGACAC CACTGCCGAT CCAAAGCCAA GCGCTCACGC CACCACCAGA ACCCTCGGGC 2700
TGAAGCGCCC TGCTATGTCT CACACCCCTC ACCCGTGCCA CCCTCCACCC CCTGGCCCAC 2760
CCCACCAGCC ACTACCCCCT TCCCAGCGGT TGTCCAGCCC TACCCTCTCC CAGTGTTCTC 2820
TCCTCGAGGA GGCCCCCAGC CTCTTCCCCC TGCTCCCACA TCTGTGCCCC CAGCTGCTTT 2880
CCCCGCCCCT TTGGTGACCC CAATGGTGGC CTTGGTGCTC CCTAACTATC TGTTCCCAAC 2940
CCCATCCAGC TATCCTTATG GGGCACTCCA GACCCCTGCG GAAGGGCCTC CCACTCCTGC 3000
CTCGCACTCC CCTTCTCCAT CCTTGCCTGC CCTCCCTCCC AGTCCTCCTC ACCGCCCGGA 3060
CTCTCCACTG TTCAACTCGA GATGCAGCTC TCCACTCCAG CTCAATCTGC TGCAGCTGGA 3120
GGAGCTCCCC CGTGCTGAGG GGGCTGCTGT TGCAGGAGGC CCTGGGAGCA GTGCCGGGCC 3180
CCCACCTCCC AGTGCGGAGG CTGCTGAGCC AGAGGCCAGA CTGGCGGAGG TCACTGAGTC 3240
CTCCAATCAG GACGCACTTT CCGGCTCCAG TGACCTGCTG GAACTTCTGC TGCAAGAGGA 3300
CTCGCGCTCC GGCACAGGCT CCGCAGCCTC GGGCTCCTTG GGCTCTGGCT TGGGCTCTGG 3360
GTCTGGTTCA GGCTCCCATG AGGGGGGCAG CACCTCAGCC AGCATCACTC GCAGCAGCCA 3420
GAGCAGCCAC ACAAGCAAAT ACTTCGGCAG CATCGACTCT TCCGAGGCTG AGGCGGGGGC 3480
TGCTCGGGGC GGGCCTGAGC CCGGGGACCA GGTGATTAAG TACGTGCTCC AGGATCCCAT 3540
TTGGCTGCTC ATGGCCAATG CTGACCAGCG CGTCATGATG ACCTACCAGG TGCCCTCCAG 3600
GGACATGACC TCTGTGCTGA AGCAGGATCG GGAGCGGCTC CGAGCCATGC AGAAGCAGCA 3660
GCCTCGGTTT TCTGAGGACC AGCGGCGGGA ACTGGGCGCT GTGCACTCCT GGGTCCGGAA 3720
GGGCCAACTG CCTCGGGCTC TTGATGTGAT GGCCTGTGTG GACTGTGGGA GCAGCACCCA 3780
AGATCCTGGT CACCCTGATG ACCCACTCTT CTCAGAGCTG GATGGACTGG GGCTGGAGCC 3840
CATGGAAGAG GGTGGAGGCG AGCAGGGCAG CAGCGGTGGT GGCAGTGGTG AGGGAGAGGG 3900
CTGCGAGGAG GCCCAAGGCG GGGCCAAGGC TTCAAGCTCT CAGGACTTGG CCATGGAGGA 3960
GGAGGAAGAA GGCAGGAGCT CATCCAGTCC AGCCTCACCT ACAGCAGGAA ACTGCACCAG 4020
CTAGACTCCA TTCTGGGACC ATCTCCAGGA GTCCATGAGA GGCTTTCTTC TCCTATGTCC 4080
CAATTCTCAG AACTCAGATG TGGCTAGACC AACCAGTGGG AAACTGCCCC AGCTTCTCCC 4140
ACCATAGGGG GCCGGACCCC CATCACCAGC CTAGGATCCA GGGGCTGCCT CTGGCCTCTT 4200
AGGGAGCAGA GAGCAGAACT CCGCAGCCCA GCCCAGAGGA GTGTCACCTC CCACCTTTGG 4260
AGAGGAATCC TTCCCTCCCC TGGACAAAGT TGCTGACAAG CTGCTGAAGT GGCCTCTCCA 4320
TATTCCAGCT GAGCCTGAAT CTGACTCCTG AGGGTTGGGG CTGCACTTAT TTATTGGGGG 4380
AGACAGCTCT TTCTCGCACC TCCTCCCCAG ATGGGAGGAG AGCCTGAGGC CCAAGCAGGA 4440
CCCGGGGGTT CCAGCCCCTA GCTGCTCTGG AGTGGGGGAG GTTGGTGGAC CATGGAGTCC 4500
CTGGTGCTGC CCCTCAGGTG GGACCCAGGC GTTCTCAGCT GTACCCTCTG CCGATGGCAT 4560
TTGTGTTTTT GATATTTGTG TCTGTTACTA CTTTTTTAAT
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus63.08 0.00e+00 1520
CGD-GaM-021007Gadus morhua55.15 0.00e+00 634
CGD-HoS-021038Homo sapiens (Human)67.44 0.00e+00 1655.2
CGD-OvA-022197Ovis aries65.49 0.00e+00 1508.8
CGD-RaN-021793Rattus norvegicus64.78 0.00e+00 1506.5
Gene Ontology

GO:0005515--protein binding
GO:0005737--cytoplasm
GO:0000978--RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0031625--ubiquitin protein ligase binding
GO:0007623--circadian rhythm
GO:0043967--histone H4 acetylation
GO:0032922--circadian regulation of gene expression
GO:0042634--regulation of hair cycle
GO:0070888--E-box binding
GO:0019900--kinase binding
GO:0043966--histone H3 acetylation
GO:0005634--nucleus
GO:0045944--positive regulation of transcription from RNA polymerase II promoter
GO:0008134--transcription factor binding
GO:0045892--negative regulation of transcription, DNA-templated
GO:0000122--negative regulation of transcription from RNA polymerase II promoter
GO:0000989--transcription factor activity, transcription factor binding
GO:0010608--posttranscriptional regulation of gene expression
GO:0070932--histone H3 deacetylation
GO:0051591--response to cAMP
GO:0000976--transcription regulatory region sequence-specific DNA binding
GO:0031490--chromatin DNA binding
GO:0002028--regulation of sodium ion transport
GO:0042752--regulation of circadian rhythm
GO:2000323--negative regulation of glucocorticoid receptor signaling pathway
GO:0009416--response to light stimulus
GO:0043153--entrainment of circadian clock by photoperiod
GO:0097167--circadian regulation of translation