CGDB Gene Information

Tag Content
CGDB ID CGD-EqC-020992
Uniprot Accession F6ZZH0; F6ZZH0; F6ZZH0_HORSE
Protein Name Uncharacterized protein
Gene Name PER2
Ensembl Information ENSECAT00000014506; ENSECAP000000116
Organism Equus caballus
NCBI Taxa ID 9796
Circadian Information
Evidence Phase Amplitude
(FOLD)		 Sentence Tissue/Cell Data type PMID
Peak Trough External
condition
Small-scale ZT 6 ZT 18 LD 5.00 The core clock genes, ARNTL and NR1D1, showed 24-h rhythmicity both pre- and post-exercise, while PER2 expression was rhythmic post-exercise but not pre-exercise. skeletal muscle Small-scale [1]
Protein Sequence
(Fasta)		 SPDAFSLMMA KSEHNPSTSG CSSEQSAKAD THKELIKTLR ELKVHLPADR KAKGKASTLA 60
TLKYALRSVK QVKANEEYYQ LLMSSENHSS SADVPSYTIE EIESATSEFI VKNADMFAAA 120
VSLVTGKILY ISDQVASIFH CKRDTFYDAK FVEFLAPHDV SVFHSSTTPY KLPPWSICGG 180
ADSFTQECME EKSFFCRVSV GKNHENEIRY HPFRMTPYLV KVRGPHAPES QLCCVLLAER 240
VHSGYEAPRI PPEKRIFTTT HTPNCLFQDV DDRAVPLLGY LPQDLIETPV LVQLHPSDRP 300
LMLAIHKKIV QSGGQPFDYS PIRFRARNGE YITLDTSWSS FVNPWSRKIS FIIGRHRVRV 360
GPLNEDVFSA QPCAEEKALH PSIQELTEQI HRLLLQPVPH SGSSGYGSLG SNGSHEHLMS 420
QTSSSDSNGH EDSCPRRAEI CKNGNKVKNK SHYPDESGEQ KKNSATEMHS RSPAQRTAVP 480
AAEKDSSGAS PAKASLPEEL ACRNPPAGSY QQISCLDGVM RYLESCSEAS TLKRKCEFPA 540
NVLTQKASDK RKATVGPGLR CTETASHPKV NSHADVSAHL TSLTLPGKAE SVVSLTSQCS 600
YSSTIVHVGD KKPQPELETV EDPASGPESV DCPVGPALPC SLGQEKEPFR KLGLTKEVLA 660
AHTQKEEQSF LLKFKEIQKL DLFQSRCHYY LEERSKGQSN ERIVPGLRNT SGIDSSWKKT 720
GKSRKLKSKR VKPRDSSEST GSGGPVPHRA PLGGLNATAW SPSDASQSSC PAMPFPAPVP 780
AYSLPVFPTP GIVPAPGSMA AAPLAPHTSF AVPTVPMDTQ HEFAVQPPPF ATPLGPVMAL 840
VVPSYPFSPV TSNLPQAFFT SQPNFPSEVL PASQPEFPGR TSSPRQPCAS TTPATPPSVA 900
APTGRASPPL FQSRGSSPLQ LNLLQLEETP EGSTAATATA GTTVTAGTTG AGPDCKPGAS 960
CNQQPKALST RHEPADPQSS DALSTSSDLL DLLLHEDLCS ATGSALSGSG ASATSDSLGS 1020
GLLACEASRS GTGISDTSHT SKYFGSIDSS ENNHKAKAKV DVDGSEHFIK YVLQDPVWLL 1080
MADTDDSVMM TYQMPSRNLE TVLKEDREKL KVMQRFQPRF TEGQKQELRA VHPWVQAGGL 1140
PAAVDVAGCV YCENKGKGNI FVPYEEDIPP LQLSEATDTK EEENGAPLSH RSKEQS 1196
Sequence Source Uniprot/ENA
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-AiM-035243Ailuropoda melanoleuca71.4 0.00e+00 1697.2
CGD-AnP-031610Anas platyrhynchos52.89 0.00e+00 1177.9
CGD-AnC-071415Anolis carolinensis52.39 0.00e+00 1102.8
CGD-AsM-058639Astyanax mexicanus43.13 0.00e+00 871.7
CGD-BoT-059492Bos taurus58.07 0.00e+00 803.1
CGD-CaJ-071069Callithrix jacchus71.24 0.00e+00 1670.6
CGD-CaF-038893Canis familiaris69.54 0.00e+00 1634.4
CGD-CaP-043134Cavia porcellus65.52 0.00e+00 1522.3
CGD-ChS-062246Chlorocebus sabaeus69.58 0.00e+00 1619.8
CGD-DaR-045081Danio rerio50.89 0.00e+00 799.7
CGD-DaN-045719Dasypus novemcinctus69.43 0.00e+00 1026.9
CGD-DiO-057828Dipodomys ordii65.17 0.00e+00 1517.3
CGD-FeC-047752Felis catus68.38 0.00e+00 1613.2
CGD-FiA-064838Ficedula albicollis51.56 0.00e+00 1162.5
CGD-GaM-045447Gadus morhua53.47 0.00e+00 708
CGD-GaG-021834Gallus gallus51 0.00e+00 1144.8
CGD-GaA-048428Gasterosteus aculeatus43.02 0.00e+00 864.4
CGD-GoG-030217Gorilla gorilla68.63 0.00e+00 1591.2
CGD-HoS-021036Homo sapiens (Human)68.83 0.00e+00 1597.8
CGD-IcT-068082Ictidomys tridecemlineatus66.17 0.00e+00 1548.9
CGD-LaC-051209Latimeria chalumnae47.03 0.00e+00 1003.4
CGD-LeO-053401Lepisosteus oculatus43.77 0.00e+00 904.8
CGD-LoA-040113Loxodonta africana65.3 0.00e+00 1521.5
CGD-MaM-036246Macaca mulatta67.75 0.00e+00 1562
CGD-MiM-038285Microcebus murinus75.3 0.00e+00 1122.5
CGD-MuP-066925Mustela putorius furo72.08 0.00e+00 1711
CGD-MyL-037266Myotis lucifugus72.13 0.00e+00 1714.9
CGD-NoL-067961Nomascus leucogenys67.83 0.00e+00 1572
CGD-OrN-068951Oreochromis niloticus44.23 0.00e+00 931.8
CGD-OrA-038635Ornithorhynchus anatinus55.97 0.00e+00 1315.8
CGD-OrC-065009Oryctolagus cuniculus61.39 0.00e+00 1335.1
CGD-OtG-040337Otolemur garnettii68.27 0.00e+00 1616.3
CGD-PaT-055402Pan troglodytes65.46 0.00e+00 1280
CGD-PaA-028191Papio anubis68.83 0.00e+00 1599.7
CGD-PeS-059572Pelodiscus sinensis50 0.00e+00 1122.1
CGD-PoF-037315Poecilia formosa41.79 0.00e+00 877.5
CGD-PoA-066943Pongo abelii69.59 0.00e+00 1585.1
CGD-PtV-055162Pteropus vampyrus74.36 0.00e+00 1008.8
CGD-SaH-062356Sarcophilus harrisii54.84 0.00e+00 1260
CGD-SuS-044235Sus scrofa63.38 0.00e+00 1181.4
CGD-TaG-066410Taeniopygia guttata51.08 0.00e+00 1146
CGD-TeN-067451Tetraodon nigroviridis44.73 0.00e+00 943.7
CGD-TuB-057033Tupaia belangeri86.36 6.00e-156 548.9
CGD-TuT-034633Tursiops truncatus65.86 0.00e+00 1498.8
CGD-XeT-058979Xenopus tropicalis54.93 6.00e-166 582.4
CGD-XiM-041539Xiphophorus maculatus51.5 0.00e+00 750.4
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005654--C:nucleoplasm
Interpro

IPR000014--PAS
IPR013655--PAS_fold_3
IPR022728--Period_circadian-like_C
PROSITE

PS50112--PAS
Pfam

PF08447--PAS_3
PF12114--Period_C
SMART

SM00091--PAS