CGDB Gene Information

Tag Content
CGDB ID CGD-PoF-037315
Ensembl Accession ENSPFOP00000026743.1
Protein Name PER2 (1 of many)
Ensembl Information ENSPFOG00000006138; ENSPFOT00000028879
Organism Poecilia formosa
NCBI Taxa ID 48698
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 6 ZT 18 LD 5 skeletal muscle Predicted from orthologs F6ZZH0
ZT 21 ZT 9 LD 6 duodenum Predicted from orthologs Q8QGQ8
ZT 2 ZT 18 LD 3.17 embryos Predicted from orthologs Q8QGQ8
ZT 6 ZT 18 LD 8 embryos Predicted from orthologs Q8QGQ8
CT 12 CT 0 DD1 3 granulosa cells Predicted from orthologs Q8QGQ8
ZT 3 ZT 18 LD 84.29 pineal glands Predicted from orthologs Q8QGQ8
ZT 23 ZT 11 LD 2.25 spleen Predicted from orthologs Q8QGQ8
ZT 16 ZT 4 LD 9 abdominal adipose tissue Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 anterior cingulate Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 2.05 area postrema Predicted from orthologs Q9Z301
ZT 18 ZT 2 LD 6.38 AV3V Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 14 basolateral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 10 ZT 6 LD 2 caudal ventrolateral medulla Predicted from orthologs Q9Z301
CT 12 CT 8 DD17 4.35 colon Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 3.29 dorsal vagal motor nucleus Predicted from orthologs Q9Z301
ZT 2 ZT 14 LD 1.8 dorsomedial nucleus Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 5.5 entral nucleus of the amygdala Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 5.7 heart Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 15 hippocampus Predicted from orthologs Q9Z301
ZT 16 ZT 3 LD 57 intestinal jejunal mucosa Predicted from orthologs Q9Z301
CT 16 CT 4 DD17 5 liver Predicted from orthologs Q9Z301
ZT 14 ZT 2 LD 8.5 liver Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q9Z301
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q9Z301
ZT 0 ZT 12 LD 7 nucleus accumbens shell Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.07 nucleus ambiguus Predicted from orthologs Q9Z301
ZT 14 ZT 6 LD 2.63 paraventricular nucleus Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 4 prefrontal cortex Predicted from orthologs Q9Z301
ZT 12 ZT 8 LD 2.5 PVN Predicted from orthologs Q9Z301
ZT 16 ZT 4 LD 2 rostral agranular insula Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 3.92 SCN Predicted from orthologs Q9Z301
ZT 8 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
ZT 12 ZT 20 LD 2 SCN Predicted from orthologs Q9Z301
Descriptionperiod circadian clock 2 [Source:HGNC Symbol;Acc:HGNC:8846](View all)
Protein Sequence
(Fasta)		 MSEDSNPKLY RFSTLDGCEQ NREDQRPRRG SMSKLHRMAS SYSDGCGRQD RVELGSELGL 60
ASEGSDSSHE HPACLGSPHD DRKRQRTPLH EDVEMGGSGW SGSGTESHGN ESHGNESHGN 120
GSVGSSNGNG KDSALMESSG SNKSSNSHSP SPPSSSNAFS LMSSEQDNPS TSGCSSEQSA 180
KAKTQKELFK TLKELKMHLP PEKRSKGKSN TVNTLKYALR CIKQVKANEE YYQMLMINDS 240
QPPGFDVSSY TIEEINTITS EYTLKNTDIF AVAVSLITGK IVYISDQAAS ILNCKREVFN 300
NAKFVEFLTP QDVSVFYSFT TPYRLPSWSM CTGAESSPTE CMQEKSFFCR ISGGKEREGD 360
LQYYPFRMTP YLMKVQDAEL SEEQFCCLLL AERVHSGYEA PRIPPDKRIF TTTHTPNCVF 420
QDVDERAVPL LGYLPQDLIG TPILLNLHPS DRPLMLAVHR RILQCAGQPF DHSSIRFCAR 480
NGEYITIDTS WSSFVNPWSR KVSFVIGRHK VRMGPVNEDV FAAPAFHGGK MMDSDIQEIS 540
EQIHRLLLQP VHNVGSSGYG SYGSNGSHEQ QVSISSSSES NGNIPVGNTA EETSKTKPSR 600
TFQEICKGVH MLKNHDSQVC MRSSSVWQPK TEQRKTGDGK QVRDNTGTNM DDFICKDQTV 660
CSYQQISCLD SVIRYLESCN VPITVKRKYQ FSSNTTSSNS DDDKRGSEDG MQVPQGTHPD 720
PLMLDTQPGL SNMKAPKKPP TGAAAVVGGT LAPLTLPSKA ESVVSITSQC SYSSTIVHVG 780
DKKPQPESEI IEDVAESPAP PAVPVSMVSP PSQEKEAYKR LGLTKEVLAA HTQKEEQAFL 840
NRCRELHNAR SFQKECSSCL HNQRGLTNAE DSAGQQGVAK QGPTRPETTT KKCNRNRKSK 900
KPRMKHPDSS DSAVSNRKPR PPLQGLNQTS WSPSEASQSA FNVSYPTMVP AYPLYPPTPA 960
APAQGSRPDA SQSSAFGEGQ NAHSTPFPPP IVTPVVALVL PNYLFPHMGQ LNQTPPAAYP 1020
MQTQLSFTPQ QPFPVQTAFS PQHLFQAAQA PYATQQPFTA QPSFPVQTPF VAQTPYPAQP 1080
FPYTIASEPP KTLTAEPREG AASRSSTPAS AAREPTTSPP LFESRCSSPL QLNLLSMEEG 1140
QRSLERQDST AVQAGGPGSG AAVVSGATGD KGGAATKTDN HQQLEPRGRG AHSDGNSSSC 1200
DLLDILLQEQ EDAHSGTGSA TSGSMGSGSG SNDCRTSASG ASGSRTGSSN TSKYFGSIDS 1260
LEHDLKEKGK PKVSAQGEGE HLIKYVLQEP LWLLMANADD KVMMTYQMPS RDIQRVLRED 1320
KERLRQMQKS QPHFTSEQRR ELVEEHPWMR RGGLPAAINV KICRMSEDAA AGPIEEDLPD 1380
MDMGELGEDL GRDTERGQSQ SEEPKPQPDP
Nucleotide Sequence
(Fasta)		 CTGATTGGCT GGTGGGTTGC TGTCTTAGAA AGCCGGGGAG GAACCGACCG CTACCGTGTC 60
AGTCAGTCAG TCTGAAGCTG CTTTCCCATT GAGGAATACT GGTGGCCTTA AACCTATGTT 120
TTTTTCTACT GCAGGTTTGG CTTTTTTTTT TTACCTTGGA CACGAGAGGA AAAGAAATTT 180
TCACATCAAC AGCACAGATT GCACCTCAGC TGCTCATACA TCAACTCTAT TTCCATCCCA 240
ATGCCATGCA CCTCATGGTA TCGCCATGTG GAAAGTAACC TAGTCTTGCA TTTCCTGCCA 300
ATTCATGTCT GAGGACAGCA ACCCAAAGCT CTATCGGTTC TCCACTCTGG ACGGCTGCGA 360
ACAGAACCGC GAAGACCAAC GCCCCCGGCG TGGCTCTATG AGCAAACTCC ACCGCATGGC 420
CAGCAGCTAC AGCGACGGTT GCGGCCGGCA GGACCGGGTG GAACTAGGAT CCGAGCTGGG 480
GCTGGCGTCC GAGGGCAGCG ACAGCAGCCA TGAGCACCCA GCGTGTCTCG GCTCCCCGCA 540
CGACGACAGG AAGCGTCAGC GCACGCCTCT CCACGAGGAC GTAGAGATGG GCGGCAGCGG 600
CTGGAGCGGC AGCGGCACAG AATCCCACGG CAACGAATCG CACGGCAATG AGTCCCACGG 660
CAACGGGTCA GTGGGCAGTT CGAATGGCAA CGGGAAGGAT TCTGCTCTGA TGGAGTCGTC 720
GGGGAGCAAC AAGAGCTCCA ACTCTCACAG TCCTTCACCC CCAAGCAGCT CCAACGCCTT 780
CAGCCTGATG AGCTCTGAGC AGGACAACCC TTCAACCAGC GGCTGCAGCA GCGAACAGTC 840
GGCCAAAGCC AAGACTCAGA AGGAGCTCTT CAAGACTCTC AAGGAGCTCA AGATGCACCT 900
GCCTCCAGAA AAGAGGAGTA AGGGCAAATC CAACACTGTG AACACGCTCA AATATGCTTT 960
GCGGTGTATC AAACAGGTGA AAGCTAATGA GGAATACTAC CAGATGCTGA TGATTAATGA 1020
CAGTCAGCCT CCTGGCTTCG ACGTGTCTTC ATACACCATT GAAGAAATTA ACACCATCAC 1080
TTCAGAATAC ACCCTGAAAA ACACAGACAT TTTTGCCGTA GCGGTGTCTC TCATCACCGG 1140
GAAGATTGTT TACATCTCTG ACCAGGCTGC CTCCATACTG AACTGCAAGC GGGAAGTTTT 1200
CAACAACGCC AAGTTTGTGG AGTTCCTGAC GCCTCAGGAC GTCAGCGTGT TCTACAGCTT 1260
CACCACGCCG TACCGCCTGC CCTCGTGGAG CATGTGCACC GGCGCAGAGT CGTCTCCCAC 1320
AGAGTGCATG CAGGAGAAAT CCTTCTTCTG CCGCATCAGT GGTGGGAAGG AGCGTGAGGG 1380
GGATCTGCAG TACTATCCTT TCCGGATGAC TCCGTACCTC ATGAAGGTTC AAGATGCTGA 1440
GCTGTCTGAA GAGCAGTTCT GCTGCCTCCT GCTGGCTGAG AGGGTGCACT CTGGATATGA 1500
AGCTCCCAGG ATTCCTCCAG ATAAACGGAT TTTTACCACC ACACACACTC CTAACTGTGT 1560
GTTCCAGGAT GTCGATGAGA GGGCGGTCCC TCTGCTGGGA TACCTCCCCC AAGACCTGAT 1620
CGGGACACCC ATTCTGCTCA ACCTGCACCC GAGTGACCGG CCTTTAATGC TGGCTGTGCA 1680
TCGCAGAATT CTGCAGTGCG CCGGACAGCC GTTCGATCAT TCCTCGATCC GTTTCTGTGC 1740
GAGAAACGGC GAGTATATCA CCATCGACAC CAGCTGGTCC AGCTTTGTGA ATCCCTGGAG 1800
CCGCAAGGTG TCTTTTGTCA TCGGGAGGCA CAAAGTGCGC ATGGGGCCAG TAAACGAAGA 1860
TGTTTTCGCA GCACCAGCTT TCCACGGAGG GAAAATGATG GATTCAGACA TCCAGGAAAT 1920
TAGCGAGCAG ATCCACAGAC TGCTGCTCCA ACCGGTCCAC AACGTGGGCT CCAGCGGCTA 1980
TGGCAGCTAC GGCAGCAACG GTTCCCACGA GCAACAGGTG AGCATCAGCT CATCCAGCGA 2040
AAGCAACGGG AACATCCCAG TAGGGAACAC GGCGGAGGAG ACGAGTAAGA CCAAACCGTC 2100
CAGGACCTTC CAGGAAATTT GTAAGGGAGT CCACATGCTG AAGAATCATG ACTCTCAGGT 2160
CTGCATGCGC TCCTCGTCGG TGTGGCAGCC CAAAACCGAG CAGAGGAAGA CCGGCGACGG 2220
TAAGCAGGTC AGAGACAACA CTGGAACCAA CATGGACGAC TTCATCTGCA AAGACCAGAC 2280
TGTGTGCTCA TACCAGCAGA TCAGCTGTCT CGACAGCGTC ATTAGGTATC TGGAGAGTTG 2340
TAACGTCCCC ATCACAGTGA AAAGGAAGTA CCAGTTCTCA TCCAACACCA CGTCGTCCAA 2400
CTCGGATGAC GACAAGAGGG GGTCGGAAGA TGGTATGCAA GTGCCTCAGG GGACACACCC 2460
AGATCCTTTG ATGCTCGACA CCCAGCCAGG CTTGTCAAAC ATGAAAGCAC CTAAGAAGCC 2520
ACCAACTGGG GCAGCTGCTG TGGTGGGGGG CACTCTGGCG CCCCTCACTC TGCCCAGTAA 2580
GGCTGAAAGT GTTGTCTCCA TCACCTCACA GTGTAGCTAC AGCAGCACCA TCGTTCATGT 2640
GGGAGACAAG AAGCCTCAAC CAGAGTCTGA GATCATCGAA GATGTTGCAG AGAGCCCAGC 2700
TCCCCCCGCT GTGCCGGTCA GTATGGTGTC TCCACCCAGC CAGGAGAAGG AGGCCTACAA 2760
GAGGCTGGGG CTCACGAAGG AGGTTCTGGC AGCCCACACC CAGAAGGAGG AGCAGGCCTT 2820
CCTGAACCGC TGCCGAGAGC TCCACAATGC CAGGAGCTTC CAGAAGGAAT GTTCCTCATG 2880
TTTGCACAAC CAGAGAGGCC TGACTAACGC CGAAGATTCA GCTGGTCAAC AGGGAGTTGC 2940
CAAACAAGGC CCAACCCGGC CAGAGACGAC CACCAAGAAA TGCAACCGCA ACAGGAAGTC 3000
CAAGAAACCG CGGATGAAGC ATCCTGACTC GTCTGACAGC GCCGTGTCCA ATCGCAAACC 3060
CCGGCCCCCT CTTCAGGGTC TCAACCAGAC GTCTTGGTCC CCGTCTGAAG CATCCCAGTC 3120
AGCTTTTAAC GTCTCCTACC CCACCATGGT GCCTGCATAT CCGCTGTACC CGCCAACGCC 3180
TGCTGCGCCA GCTCAGGGGT CCCGCCCCGA TGCGTCTCAG TCCTCTGCCT TTGGGGAGGG 3240
GCAGAACGCC CACAGCACTC CGTTCCCCCC TCCGATTGTT ACACCGGTGG TGGCTCTGGT 3300
GCTGCCCAAC TACCTTTTCC CCCATATGGG ACAGTTGAAT CAGACGCCAC CGGCGGCGTA 3360
CCCAATGCAG ACCCAGCTCT CCTTCACCCC CCAGCAGCCA TTCCCAGTGC AGACTGCCTT 3420
TTCCCCCCAG CACCTGTTTC AAGCTGCGCA GGCCCCCTAC GCTACCCAGC AGCCCTTCAC 3480
CGCCCAGCCG TCTTTCCCAG TGCAGACACC CTTTGTGGCT CAAACCCCCT ACCCAGCTCA 3540
GCCTTTCCCC TACACCATAG CCTCCGAGCC CCCCAAAACT CTCACAGCAG AGCCCAGAGA 3600
AGGGGCGGCT TCTCGCTCCT CCACCCCCGC CTCGGCGGCC CGGGAGCCCA CCACTTCCCC 3660
TCCCCTGTTT GAGTCGCGCT GCAGCTCCCC GCTGCAACTC AACCTGCTGA GCATGGAGGA 3720
GGGGCAGCGC TCACTGGAGC GGCAGGACAG CACCGCAGTC CAGGCTGGGG GTCCAGGCAG 3780
TGGGGCAGCA GTTGTGTCGG GGGCAACAGG AGACAAGGGT GGAGCTGCAA CCAAGACTGA 3840
TAATCACCAA CAGCTGGAAC CCAGAGGCAG AGGGGCTCAC AGCGATGGCA ACTCCTCGTC 3900
CTGTGACCTT CTGGACATCC TGTTACAGGA GCAGGAGGAC GCTCACTCCG GCACCGGGTC 3960
AGCCACCTCA GGTTCCATGG GCTCAGGCTC CGGATCCAAC GACTGTCGGA CCTCAGCTAG 4020
TGGAGCGTCT GGCAGCAGAA CAGGAAGCAG CAACACCAGC AAGTACTTCG GCAGCATCGA 4080
CTCTCTGGAG CACGACCTGA AGGAAAAAGG CAAGCCCAAA GTGTCCGCTC AGGGGGAAGG 4140
GGAACATTTA ATCAAATACG TTCTGCAGGA GCCTCTTTGG TTGCTCATGG CCAACGCTGA 4200
CGACAAGGTC ATGATGACAT ATCAAATGCC ATCCAGGGAC ATTCAGAGGG TTCTGAGAGA 4260
AGACAAGGAG AGGCTGCGAC AGATGCAGAA GAGTCAGCCT CACTTCACCT CAGAGCAGCG 4320
GCGGGAGCTG GTGGAGGAGC ATCCCTGGAT GAGGAGAGGA GGCCTCCCCG CAGCTATCAA 4380
TGTGAAGATC TGTAGAATGT CCGAGGACGC TGCTGCTGGA CCCATAGAGG AGGATCTACC 4440
CGACATGGAC ATGGGCGAAC TGGGCGAGGA TCTGGGCAGA GACACTGAGA GAGGCCAGAG 4500
CCAATCAGAG GAGCCCAAAC CTCAGCCGGA CCCT 4534
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020992Equus caballus41.79 0.00e+00 877.5
CGD-GaG-021834Gallus gallus48.62 0.00e+00 858.2
CGD-RaN-022186Rattus norvegicus42 0.00e+00 882.9
Gene Ontology

GO:0005515--protein binding
GO:0006355--regulation of transcription, DNA-templated