CGDB Gene Information
| Tag | Content | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| CGDB ID | CGD-AsM-064219 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Accession | ENSAMXP00000020518.1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Name | per1a | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl Information | ENSAMXG00000019909; ENSAMXT00000020518 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Organism | Astyanax mexicanus | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NCBI Taxa ID | 7994 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Circadian Information |
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| Description | period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Sequence (Fasta) |
MSDANLKIPV SNDLKKGVRC VGDDDKKKHS PRLNSRGVVS QSAQLHSDDT DGQSSGNDSA 60 ERECDGHTGQ EASTCSSNNG KDSAMETTES KSSNSHSPSP PSSSAAYSLL SGSSEQDQPS 120 TSGCSSDQPA RRQTQKELLK ALHELKIRVP AEQRGKGRSS TLASLQYALN CVKQVRANQE 180 YYHQWSVEES HGCCLDLSAF TIEELDNITS EYQLQNTDTF SVAVSFLSGK VVYISPQASS 240 LLRCKPERLQ GAVFSEFLAP QDVSTFYSST APCRLPPWAS CTRAASSVDC AQEKSMFCRI 300 SGERESGGEM KYYPFQLTPY QLTLRDSDTS QPEPCCLLIA ERVHSGYEAP RIPADKRIFT 360 TSHTPSCLFQ EVDERAVPLL GYLPQDLVGT PLLLYLHPED RPLMVEIHKK IVQYAGQPFD 420 HSPLRMCARS GEYLTMDTSW SSFINPWSRK VAFIVGRHKV RTSPLNEDVF TAPEEGEVRA 480 MSPEVPQFSE QIHRLLVQPV HSGGGGGGSQ GYSSLGSSGS RELQPSAASS SESTGAAAEE 540 PPHVRKLTFQ QMCKDVHMVK TSGQQLYAES RNRPPPRKQA SSGDAVKAAE TESTSKEVQQ 600 MATITPKIQA STQLPRKEIP ATFSYQQINC LDSIIRYLES CNVPNTVKRK CGSSSGTTSS 660 TSDDDKWREA AGPDIVETLE VAEVSKVVPA EPTHPLTPLA LHYKAESVVS VTSQCSFSST 720 IVHVGDKKPP ESDIVMMEEA PTTPTPAPST PVPQNPTTSP TGAIAQPAAS PSPAEKKEKE 780 QEGRRGGTGV NRWGLTKEVL STHTQQEEQA FLNRFRDLSQ LPLIESSPPP RRQTATPATK 840 GVRSSQNYPS GGGSGRRRGR GGKRLKHQAE VPFFDTPSLS TSGPSIPPRS TAEGPSVPAF 900 SSSQHLSGGA HSSSSPWPTS VGSQASGPPI MTSYPPGCMP FYSMYPPFPF PQMETDPRMQ 960 AAFSCPQQGP RFPMQATQMF PSMAPPVMAF ILPNCMFPQL NGANVPVQQL AQAMPMPTQL 1020 NPQFNPAVAQ ISPAVANFNP TVGQFNPLAP QMNPTQLLTV PQQFYNPNLM FGFQNGAAAF 1080 ASPTSAAPPP RVPSRSSTPQ STGQPVGDNE RAGSPLFHSR CSSPLNLLQL EELPSNHTDV 1140 TQQTPPPVGG ASQGPQTSGT RSSNKDNVSY IMVCSQAEVS ESNQDAMSTS SDLLDLLLQE 1200 DSRSGTGSAA SGSGSSGSGS GSSGSGSNGC STSGSGTRSS NTSKYFGSID SSENDHGHKQ 1260 ASGDSGEEQF IKYVLQDPIW LVMANTDEKV MMTYQMPKRD RDTVLREDRE LMKTAKMQQP 1320 HFTEKQKKEL SQVHPWIQTG CLPKAINITS CIGCGSPTEA SSAPPFDVEL HDMDLTRILR 1380 EENEHMTAVI AELLPDSPQS SETLQKEAQT NAATDTGALN KVVEEAEVTS SSVEVKQD 1438 |
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| Nucleotide Sequence (Fasta) |
TCATCCGGTG GCCAATCGCA GCAGAGAGTC GTTGTGCATG CACGTGTAGT GTTTCGTGTT 60 GAGTGTGCTG GAGGTCCGTT GACATGAAGT GGACTCAGTT TTGCATCGCT GTGGAGCTGT 120 TTTCATTTCT GTACGATTTC TTCGCACTTT TCTTTTTCTC CACGCGCGCA CTTAGAGACC 180 TTCGCCCACT CGGTGTCTAA CACGAAGGTG CACTGTAGTA ATTCCACAAT CAGCACAGAA 240 TACTTGACAG GAAGAGAATC TACAAGTCAA GAAAAACCTA CAGACTGATG GTTCTATATC 300 TTATGTGGAT TCTAATTCAG TGCTGATTCA TGCTTGGTTA TAGGAAAACT TCAGTGCACA 360 TGCAAGGAGC ACACTGTGTG ACATAGCAGA GTTTTATTAT GAGTGATGCT AACTTAAAAA 420 TCCCTGTCAG CAATGATCTT AAAAAAGGGG TTAGATGTGT GGGTGATGAT GACAAGAAAA 480 AGCATTCCCC CAGGTTGAAC AGTAGGGGCG TGGTCAGTCA AAGTGCTCAG TTGCACTCTG 540 ACGACACGGA CGGTCAGTCC AGCGGGAACG ATTCAGCTGA GCGAGAGTGC GACGGCCACA 600 CGGGACAGGA AGCTTCCACG TGCAGCTCTA ACAATGGAAA AGACTCTGCG ATGGAGACTA 660 CAGAGAGCAA GAGTTCCAAC TCCCACAGCC CATCTCCTCC GAGCAGTTCG GCCGCATATA 720 GTCTGCTGAG CGGCAGCTCC GAGCAGGACC AGCCATCTAC CAGCGGCTGC AGTAGTGACC 780 AGCCGGCTCG CCGGCAGACT CAGAAGGAGC TGCTGAAGGC GCTTCATGAG CTGAAGATCC 840 GGGTTCCTGC AGAGCAGCGA GGGAAAGGGC GGTCCAGCAC ACTGGCCTCA CTGCAGTACG 900 CCCTTAACTG TGTTAAACAA GTTAGAGCTA ACCAGGAATA TTACCACCAG TGGAGTGTGG 960 AGGAAAGCCA TGGCTGCTGT TTGGATCTGT CTGCGTTCAC CATCGAAGAA CTGGACAATA 1020 TCACTTCAGA ATACCAACTT CAAAACACGG ATACGTTCTC GGTGGCAGTT TCCTTTCTCT 1080 CAGGGAAAGT GGTGTATATC TCTCCCCAGG CGTCGTCCCT GCTGCGCTGT AAGCCGGAGA 1140 GACTACAGGG GGCAGTGTTT TCAGAGTTTT TGGCCCCGCA AGACGTCAGC ACCTTCTACA 1200 GCAGCACGGC CCCCTGCCGC CTGCCTCCGT GGGCCTCCTG CACCCGCGCT GCTTCCTCAG 1260 TGGACTGCGC TCAGGAGAAG TCCATGTTCT GCCGTATCAG TGGAGAAAGA GAAAGCGGAG 1320 GAGAGATGAA ATATTACCCA TTTCAGCTGA CCCCTTATCA GCTGACCCTG CGAGACTCGG 1380 ACACATCTCA GCCCGAGCCG TGCTGTCTGC TCATCGCTGA GAGAGTACAC TCCGGATATG 1440 AGGCACCCCG TATTCCAGCA GATAAAAGGA TCTTCACCAC CAGCCACACA CCAAGCTGTC 1500 TGTTCCAGGA GGTAGATGAG AGAGCGGTGC CATTGCTAGG GTATCTACCT CAGGACTTGG 1560 TTGGAACCCC GCTGCTTTTG TACCTCCATC CTGAGGACAG GCCGCTCATG GTCGAGATCC 1620 ACAAAAAGAT TGTCCAGTAC GCGGGTCAGC CTTTTGACCA CTCACCGCTG CGCATGTGTG 1680 CACGGAGTGG AGAGTATCTG ACCATGGACA CCAGCTGGTC TTCCTTCATC AATCCCTGGA 1740 GCAGAAAGGT GGCCTTCATT GTGGGTCGCC ACAAAGTCCG AACGAGTCCC CTTAATGAGG 1800 ATGTGTTCAC GGCCCCTGAA GAAGGTGAGG TCAGGGCGAT GTCTCCCGAG GTTCCTCAGT 1860 TCAGCGAGCA GATCCACAGG CTGTTGGTGC AGCCGGTCCA CAGTGGTGGA GGTGGCGGTG 1920 GATCTCAGGG CTACAGCAGC CTTGGCAGCA GCGGCTCCCG GGAGCTCCAG CCCAGTGCAG 1980 CATCTTCCAG TGAAAGCACA GGAGCTGCTG CAGAAGAACC TCCACACGTC CGCAAACTGA 2040 CCTTCCAGCA GATGTGTAAG GATGTACACA TGGTGAAGAC CAGTGGACAG CAGCTTTATG 2100 CAGAATCCCG GAACAGACCC CCACCTCGGA AACAGGCCAG CTCAGGAGAT GCAGTGAAGG 2160 CTGCTGAAAC AGAAAGCACA TCCAAAGAGG TCCAGCAGAT GGCGACTATA ACCCCCAAAA 2220 TCCAGGCTTC CACTCAGCTA CCAAGAAAGG AGATCCCGGC CACCTTTTCA TACCAGCAGA 2280 TTAACTGTTT GGACAGCATC ATTCGTTATT TGGAAAGCTG TAATGTTCCC AACACAGTGA 2340 AGAGGAAATG TGGGTCCTCC TCCGGTACCA CCTCCTCCAC CTCTGATGAT GACAAATGGA 2400 GAGAAGCAGC AGGTCCAGAC ATAGTGGAGA CACTGGAGGT GGCCGAAGTT TCTAAGGTTG 2460 TCCCTGCAGA GCCCACTCAC CCTCTGACCC CTCTGGCTCT GCACTACAAG GCTGAGAGTG 2520 TGGTGTCTGT CACCTCTCAG TGCAGTTTTA GCAGCACCAT TGTCCATGTC GGAGACAAGA 2580 AGCCGCCAGA GTCAGACATT GTGATGATGG AGGAAGCTCC AACAACACCT ACACCAGCAC 2640 CATCAACTCC TGTCCCCCAA AACCCCACCA CATCCCCTAC AGGGGCAATA GCACAGCCTG 2700 CCGCTTCCCC CAGCCCTGCG GAGAAGAAGG AAAAGGAGCA AGAAGGGAGA AGAGGTGGTA 2760 CTGGAGTGAA CAGATGGGGG CTTACTAAAG AAGTTCTGTC CACTCACACT CAGCAGGAGG 2820 AGCAGGCCTT CCTCAACCGC TTTAGAGACC TGAGCCAGCT GCCGCTCATC GAGTCCAGCC 2880 CGCCCCCTCG CAGACAAACA GCAACACCTG CAACTAAAGG TGTCCGCAGC TCCCAGAACT 2940 ACCCATCTGG AGGTGGTAGT GGGCGTCGGC GTGGTAGAGG AGGCAAAAGA CTGAAACACC 3000 AAGCTGAGGT CCCCTTCTTT GACACCCCAT CCCTGTCAAC CTCGGGGCCT AGTATTCCTC 3060 CTAGATCTAC AGCAGAAGGT CCCAGTGTTC CAGCCTTCTC CAGCAGTCAG CATTTGTCTG 3120 GAGGGGCCCA CTCATCATCT TCTCCATGGC CTACCTCAGT GGGCTCTCAG GCTAGTGGAC 3180 CACCCATTAT GACATCATAT CCTCCTGGCT GCATGCCTTT TTATTCCATG TACCCACCTT 3240 TTCCTTTCCC ACAAATGGAG ACGGACCCAA GGATGCAGGC AGCGTTTTCC TGCCCACAGC 3300 AAGGCCCCAG GTTTCCGATG CAAGCCACGC AAATGTTCCC ATCAATGGCA CCTCCTGTGA 3360 TGGCCTTCAT TTTGCCTAAC TGTATGTTCC CTCAGCTAAA CGGTGCCAAT GTTCCAGTTC 3420 AACAACTCGC ACAGGCTATG CCCATGCCCA CCCAGCTGAA CCCACAATTC AATCCTGCAG 3480 TGGCTCAGAT AAGCCCTGCT GTGGCTAACT TTAATCCCAC TGTGGGGCAG TTTAACCCAC 3540 TAGCTCCCCA GATGAATCCC ACTCAGCTTC TAACTGTACC TCAGCAGTTT TATAACCCAA 3600 ATCTGATGTT TGGGTTCCAA AATGGAGCTG CTGCTTTTGC CTCGCCCACT TCCGCTGCCC 3660 CGCCCCCTCG TGTCCCCTCC CGTTCCAGTA CCCCTCAGTC CACTGGCCAG CCAGTGGGAG 3720 ACAATGAACG GGCGGGATCT CCTCTTTTCC ACTCGAGATG CTCCTCGCCG CTCAATCTGC 3780 TGCAACTGGA GGAGTTGCCA AGCAACCATA CTGATGTCAC ACAGCAGACA CCACCCCCAG 3840 TGGGAGGGGC CAGCCAAGGA CCACAGACTT CTGGCACTCG TAGCAGTAAT AAAGATAATG 3900 TGAGTTACAT TATGGTCTGC TCCCAGGCTG AGGTCAGTGA GTCCAACCAG GATGCCATGT 3960 CCACCTCGAG TGACCTGCTG GACCTCCTGC TGCAGGAGGA CTCTCGCTCA GGCACGGGTT 4020 CTGCGGCCTC AGGATCAGGG TCCTCAGGAT CTGGCTCTGG ATCCTCTGGT TCTGGATCTA 4080 ATGGCTGTAG CACATCAGGA AGCGGAACCA GAAGCAGTAA TACCAGCAAG TATTTTGGAA 4140 GCATAGACTC GTCAGAGAAC GACCACGGAC ACAAACAGGC ATCTGGGGAT TCTGGGGAGG 4200 AACAGTTTAT TAAGTATGTT CTCCAGGACC CGATCTGGCT TGTCATGGCC AACACAGATG 4260 AGAAAGTAAT GATGACATAC CAAATGCCCA AGAGGGACAG AGACACAGTG CTGCGTGAGG 4320 ACCGAGAACT TATGAAGACC GCAAAGATGC AGCAGCCACA CTTTACTGAG AAGCAGAAGA 4380 AAGAGCTCAG TCAGGTGCAC CCGTGGATCC AAACCGGCTG CCTCCCTAAA GCCATAAATA 4440 TTACTTCCTG CATTGGGTGC GGTTCCCCTA CAGAAGCTTC TTCAGCTCCA CCATTTGATG 4500 TGGAGCTCCA TGACATGGAC CTCACCAGGA TCCTGCGGGA AGAGAACGAG CACATGACTG 4560 CAGTCATAGC TGAGTTACTT CCAGATAGCC CACAGTCATC AGAAACACTG CAGAAGGAAG 4620 CTCAGACTAA TGCTGCCACT GACACAGGAG CTTTGAACAA GGTGGTTGAG GAGGCAGAAG 4680 TGACGTCATC ATCGGTGGAA GTAAAACAAG ACTGAGACAA TCTCAGCTGT GATCAGAATG 4740 CCTTTATATG GGAATGAGCT CTGTAATCAC ACAGTTTAAA CTTTTTCAAG ATGTCTGTGT 4800 TCAGAGTTTG TTTGTGTGTG TGTGGTGTTG GAACTGTCAG AAATGTATCA TAGTCACAGT 4860 AATTAAAGCA AAAAAAAAAA AAAACGGAAA AAAAAGGATT TAATTTTATT AGTTAGAGAT 4920 CACAAGATCA CGTTAATACA AAATGCATTA GAAATAGTAT TTTTATGTAT ATTCAGTTTT 4980 TAAGTGTCAG TCTTTTTTGC CATTTCCAAA AGTCATTGTT TAAATGATTG TATGTACCAA 5040 AGGTACTTAT TTTACACCCT ACAATAGACA CACTTTAGGT AAACCTGTAC AGAATACACA 5100 CACAGACTGT ATGTGTGTGA TATGTATGTG AAGTCCGTCT TCATCTTTTG TTGTTTGTTA 5160 AATATTTTAA TGTTGAATTT TTATGTCTGA CAGGTGTTTT CATGCAGGTT AGAGCTGCTG 5220 AGTGTCCTCG AATGATGACA CCCTGACCAA ATCCTATTTT TCCCATATAG ATGAAAATAT 5280 GCAGTTTGTA TTGTTGTAGT GATTATTGTT TTTCTATTTT TATTTGTCTG TTTTTGGACA 5340 AAAGGAGCAA AAATAAGCCT CCAATTTGTG AGGAGCTGAT CTGGCCGTTC CTATGGAAAC 5400 GCTGTGGTCC TGCTGGGTGG ACAGTAAACC CATATAAACA GAAAAAAGCA TTCGGAGAAG 5460 CAACCGAGCA CAACGTGCCT GAGGTTCAAA GCGATTTCAA GACTTACCAC AGCCGACAAC 5520 GCTAATTCTG TTACTCTTTA AAACACTGGA GCTCAATTAG TGTCTGTTGG CTGAATTTAA 5580 CCCAAGTTTG AATGCTGGGT AATTTCTAAA AGCTTGTCTG TGAAAGCAGT CAGGTTCCAA 5640 TCAGTTTACA TGCAGTAGAT CGTCTTGATA GGAGCTTTTT TTTTGTGGAG GACAATCGTT 5700 TTTGCATTGT ATGAACTCTT TACCAGTGGG TGGATGTGGG AGGAAAATTT CAGTTGTGTT 5760 TAGTGTAACC TCTATCTGAT ACTTGCATCT TACAGCATTC ATTACTGAAC ATATTTTGAC 5820 ATGTTTATCT GCACTTAGAA CATGAAAGAT AACTTACTGT CTTACAGAAA TTAATGGGCA 5880 ACACAGCTTA CGAGCCTTTT TTTAAATCAA ATTCACTGGG AAGGTGATTC AGAACATTTA 5940 ATAGGAAATT GCTTTCAAAC ACTTGTAATG AAAGTCAATG TGCAGTTGTT TTAGAACATT 6000 ATTAATGGAA GTTAATAGGG AGTGGCTTCA GAACATTGAT AATAGAAATC AATAGGCAGT 6060 TTGTGGGGCA ACTCAAAACG TACTTATTAA AAATTATAAT AAAGGTTTTA AAGCAACTGC 6120 CTATTGACTT CTGTCAGTCA GTGAGCCTTT CTTTTTCGCT AAATATAGAT AAACTGTCTC 6180 AACATTATTA ACAGTGGAAA TTAACCATAC AGTGCAGATG CAGCAGATAG ACGTTAGGCT 6240 AAAAAATGTT TTTTTGAGAA TTACTCTGTT TCCTTTAATA TTCAATAAAA TAACGGTTAA 6300 AAAATGTGTC TTTTGTGGTA TTTTATTTAG AATAGCAGTT GAATTCTCAG AAATTGAGTT 6360 CTGTTGTTTA GTTAATGCGT CATGATTCCT TTGAAAGCCA TAAACAAAAA CGAAATCCAG 6420 TCCTCCCAAC GCTGAATGAT TAAGGAATAG TTCAATTCAT GCCAAACAAA TTTTGAGTCA 6480 CAGGCAACTG GAAAGAATTT TTGAGTGTGT GTGTGTGTGT ATATGTGTGG GAGTGAAAAT 6540 AGTTGCTTCT TCCCTCCCAT TTTTTCCATT GTTGAAGAAG CACTGGACAC AATCCATAAT 6600 TTAACATGCA ATTGCTGAGC ATGGAGGCAG CTTGTGGGAA TTACGCCAAA ATTCCTTACG 6660 CAAACATTCT GAGTTTTAGT TGGAATGCTC CCCTAGGCCT GGGAGACCCT TCCAAAGTAT 6720 GCCAGAG 6727 |
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| Sequence Source | Ensembl | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Orthology |
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| Gene Ontology | GO:0005515--protein binding |
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