CGDB Gene Information


Tag Content
CGDB ID CGD-HoS-062136
Ensembl Accession ENSP00000479223.1
Protein Name PER3
Ensembl Information ENSG00000049246; ENST00000614998
Organism Homo sapiens (Human)
NCBI Taxa ID 9606
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)
MPRGEAPGPG RRGAKDEALG EESGERWSPE FHLQRKLADS SHSEQQDRNR VSEELIMVVQ 60
EMKKYFPSER RNKPSTLDAL NYALRCVHSV QANSEFFQIL SQNGAPQADV SMYSLEELAT 120
IASEHTSKNT DTFVAVFSFL SGRLVHISEQ AALILNRKKD VLASSHFVDL LAPQDMRVFY 180
AHTARAQLPF WNNWTQRAAA RYECAPVKPF FCRIRGGEDR KQEKCHSPFR IIPYLIHVHH 240
PAQPELESEP CCLTVVEKIH SGYEAPRIPV NKRIFTTTHT PGCVFLEVDE KAVPLLGYLP 300
QDLIGTSILS YLHPEDRSLM VAIHQKVLKY AGHPPFEHSP IRFCTQNGDY IILDSSWSSF 360
VNPWSRKISF IIGRHKVRTS PLNEDVFATK IKKMNDNDKD ITELQEQIYK LLLQPVHVSV 420
SSGYGSLGSS GSQEQLVSIA SSSEASGHRV EETKAEQMTL QQVYASVNKI KNLGQQLYIE 480
SMTKSSFKPV TGTRTEPNGG GESANGGGEC KTFTSFHQTL KNNSVYTEPC EDLRNDEHSP 540
SYQQINCIDS VIRYLKSYNI PALKRKCISC TNTTSSSSEE DKQNHKADDV QALQAGLQIP 600
AIPKSEMPTN GRSIDTGGGA PQILSTAMLS LGSGISQCGY SSTIVHVPPP ETARDATLFC 660
EPWTLNMQPA PLTSEEFKHV GLTAAVLSAH TQKEEQNYVD KFREKILSSP YSSYLQQESR 720
SKAKYSYFQG DSTSKQTRSA GCRKGKHKRK KLPEPPDSSS SNTGSGPRRG AHQNAQPCCP 780
SAASSPHTSS PTFPPAAMVP SQAPYLVPAF PLPAATSPGR EYAAPGTAPE GLHGLPLSEG 840
LQPYPAFPFP YLDTFMTVFL PDPPVCPLLS PSFLPCPFLG ATASSAISPS MSSAMSPTLD 900
PPPSVTSQRR EEEKWEAQSE GHPFITSRSS SPLQLNLLQE EMPRPSESPD QMRRNTCPQT 960
EYCVTGNNGS ESSPATTGAL STGSPPRENP SHPTASALST GSPPMKNPSH PTASTLSMGL 1020
PPSRTPSHPT ATVLSTGSPP SESPSRTGSA ASGSSDSSIY LTSSVYSSKI SQNGQQSQDV 1080
QKKETFPNVA EEPIWRMIRQ TPERILMTYQ VPERVKEVVL KEDLEKLESM RQQQPQFSHG 1140
QKEELAKVYN WIQSQTVTQE IDIQACVTCE NEDSADGAAT SCGQVLVEDS C 1191
Nucleotide Sequence
(Fasta)
ACTCGCGCGC GGCAGAGGAG CCCCGCGAGC CCTGCCCTCG GCCGGAGTCC TGAAAGTCGA 60
GCGAGCTCCG GGTTTTGAAA ATGTTGGAGG GAAAAGCTCC TCGGAGATGA GCGTGACCCC 120
CTGGCTCGTG GTGGCCGCCT GTTCTCACTA ACGCCATGGC GGGGACCGGA GTGAGAAACC 180
GGTGTCTGTC ACTGACTGCA AAGTGAGCGA GAAGCAGGCT GCGGGCCGTC CCAGCACGAC 240
GTGGAGCCCC GCGGAGACCT CGAGATGCCC CGCGGGGAAG CTCCTGGCCC CGGGAGACGG 300
GGGGCTAAGG ACGAGGCCCT GGGCGAAGAA TCGGGGGAGC GGTGGAGCCC CGAGTTCCAT 360
CTGCAGAGGA AATTGGCGGA CAGCAGCCAC AGTGAACAGC AAGATCGAAA CAGAGTTTCT 420
GAAGAACTTA TCATGGTTGT CCAAGAAATG AAAAAATACT TCCCCTCGGA GAGACGCAAT 480
AAACCAAGCA CTCTAGATGC CCTCAACTAT GCTCTCCGCT GTGTCCACAG CGTTCAAGCA 540
AACAGTGAGT TTTTCCAGAT TCTCAGTCAG AATGGAGCAC CTCAGGCAGA TGTGAGCATG 600
TACAGTCTTG AGGAGCTGGC CACTATCGCT TCAGAACACA CTTCCAAAAA CACAGATACC 660
TTTGTGGCAG TATTTTCATT TCTGTCTGGA AGGTTAGTGC ACATTTCTGA ACAGGCTGCT 720
TTGATCCTGA ATCGTAAGAA AGATGTCCTG GCGTCTTCTC ACTTTGTTGA CCTGCTTGCA 780
CCTCAAGACA TGAGGGTATT CTACGCGCAC ACTGCCAGAG CTCAGCTTCC TTTCTGGAAC 840
AACTGGACCC AAAGAGCAGC TGCACGGTAT GAATGTGCTC CGGTGAAACC TTTTTTCTGC 900
AGGATCCGTG GAGGTGAAGA CAGAAAGCAA GAGAAGTGTC ACTCCCCATT CCGGATCATC 960
CCCTATCTGA TTCATGTACA TCACCCTGCC CAGCCAGAAT TGGAATCGGA ACCTTGCTGT 1020
CTCACTGTGG TTGAAAAGAT TCACTCTGGT TATGAAGCTC CTCGGATCCC AGTGAATAAA 1080
AGAATCTTCA CCACCACACA CACCCCAGGG TGTGTTTTTC TTGAAGTAGA TGAAAAAGCA 1140
GTGCCTTTGC TGGGTTACCT ACCTCAGGAC CTGATTGGAA CATCGATCCT AAGCTACCTG 1200
CACCCTGAAG ATCGTTCTCT GATGGTTGCC ATACACCAAA AAGTTTTGAA GTATGCAGGG 1260
CATCCTCCCT TTGAACATTC TCCCATTCGA TTTTGTACTC AAAACGGAGA CTACATCATA 1320
CTGGATTCCA GTTGGTCCAG CTTTGTGAAT CCCTGGAGCC GGAAGATTTC TTTCATCATT 1380
GGTCGGCATA AAGTTCGAAC GAGCCCACTA AATGAGGATG TTTTTGCTAC CAAAATTAAA 1440
AAGATGAACG ATAATGACAA AGACATAACA GAATTACAAG AACAAATTTA CAAACTTCTC 1500
TTACAGCCAG TTCACGTGAG CGTGTCCAGC GGCTACGGGA GCCTGGGGAG CAGCGGGTCG 1560
CAGGAGCAGC TTGTCAGCAT CGCCTCCTCC AGTGAGGCCA GTGGGCACCG TGTGGAGGAG 1620
ACGAAGGCGG AGCAGATGAC CTTGCAGCAG GTCTATGCCA GTGTGAACAA AATTAAAAAT 1680
CTGGGTCAGC AGCTCTACAT TGAGTCAATG ACCAAATCAT CATTCAAGCC AGTGACGGGG 1740
ACACGCACAG AACCGAATGG TGGTGGTGAG TCAGCGAATG GTGGTGGTGA ATGTAAGACC 1800
TTTACTTCCT TCCACCAAAC ACTGAAAAAC AATAGTGTGT ACACTGAGCC CTGTGAGGAT 1860
TTGAGGAACG ATGAGCACAG CCCATCCTAT CAACAGATCA ACTGTATCGA CAGTGTCATC 1920
AGATACCTGA AGAGCTACAA CATTCCAGCT TTGAAAAGAA AGTGTATCTC CTGTACAAAT 1980
ACAACTTCTT CCTCCTCAGA AGAAGACAAA CAGAACCACA AGGCAGATGA TGTCCAAGCC 2040
TTACAAGCTG GTTTGCAAAT CCCAGCCATA CCTAAATCAG AAATGCCAAC AAATGGACGG 2100
TCCATAGACA CAGGAGGAGG AGCTCCACAG ATCCTGTCCA CGGCGATGCT GAGCTTGGGG 2160
TCGGGCATAA GCCAATGCGG TTACAGCAGC ACCATTGTCC ATGTCCCACC CCCAGAGACA 2220
GCCAGGGATG CTACCCTCTT CTGTGAGCCC TGGACCCTGA ACATGCAGCC AGCCCCTTTG 2280
ACCTCGGAAG AATTTAAACA CGTGGGGCTC ACAGCGGCTG TTCTGTCAGC GCACACCCAG 2340
AAGGAAGAGC AGAATTATGT TGATAAATTC CGAGAAAAGA TCCTGTCATC ACCCTACAGC 2400
TCCTATCTTC AGCAAGAAAG CAGGAGCAAA GCTAAATATT CATATTTTCA AGGAGATTCT 2460
ACTTCCAAGC AGACGCGGTC GGCCGGCTGC AGGAAAGGGA AGCACAAGCG GAAGAAGCTG 2520
CCGGAGCCGC CAGACAGCAG CAGCTCGAAC ACCGGCTCTG GTCCCCGCAG GGGAGCGCAT 2580
CAGAACGCAC AGCCCTGCTG CCCCTCCGCG GCCTCCTCTC CGCACACCTC GAGCCCGACC 2640
TTCCCACCTG CCGCCATGGT GCCCAGCCAG GCCCCTTACC TCGTCCCAGC TTTTCCCCTC 2700
CCAGCCGCGA CCTCACCCGG AAGAGAATAC GCAGCCCCCG GAACTGCACC GGAAGGCCTG 2760
CATGGGCTGC CCTTGTCCGA GGGCTTGCAG CCTTACCCAG CTTTCCCTTT TCCTTACTTG 2820
GATACTTTTA TGACCGTTTT CCTGCCTGAC CCCCCTGTCT GTCCTCTGTT GTCGCCATCG 2880
TTTTTGCCAT GTCCATTCCT GGGGGCGACA GCCTCTTCTG CGATATCACC CTCAATGTCG 2940
TCAGCAATGA GTCCAACTCT GGACCCACCC CCTTCAGTCA CCAGCCAAAG GAGAGAGGAG 3000
GAAAAGTGGG AGGCACAAAG CGAGGGGCAC CCGTTCATTA CTTCGAGAAG CAGCTCACCC 3060
TTGCAGTTAA ACTTACTTCA GGAAGAGATG CCCAGACCCT CTGAATCTCC AGATCAGATG 3120
AGAAGGAACA CGTGCCCACA AACTGAGTAT TGTGTTACAG GCAACAATGG CAGTGAGAGC 3180
AGTCCTGCTA CTACCGGTGC ACTGTCCACG GGGTCACCTC CCAGGGAGAA TCCATCCCAT 3240
CCTACTGCCA GCGCTCTGTC CACAGGATCG CCTCCCATGA AGAATCCATC CCATCCTACT 3300
GCCAGCACAC TGTCCATGGG ATTGCCTCCC AGCAGGACTC CATCCCATCC TACTGCCACT 3360
GTTCTGTCCA CGGGGTCACC TCCCAGCGAA TCCCCATCCA GAACTGGTTC AGCAGCATCA 3420
GGAAGCAGCG ACAGCAGTAT ATACCTTACT AGTAGTGTTT ATTCTTCTAA AATCTCCCAA 3480
AATGGGCAGC AATCTCAGGA CGTACAGAAA AAAGAAACAT TTCCTAATGT CGCCGAAGAG 3540
CCCATCTGGA GAATGATACG GCAGACACCT GAGCGCATTC TCATGACATA CCAGGTACCT 3600
GAGAGGGTTA AAGAAGTTGT ACTAAAAGAA GACCTGGAAA AGCTAGAAAG TATGAGGCAG 3660
CAGCAGCCCC AGTTTTCTCA TGGGCAAAAG GAGGAGCTGG CTAAGGTGTA TAATTGGATT 3720
CAAAGCCAGA CTGTCACTCA AGAAATCGAC ATTCAAGCCT GTGTCACTTG TGAAAATGAA 3780
GATTCAGCTG ATGGTGCGGC CACATCCTGT GGTCAGGTTC TGGTAGAAGA CAGCTGTTGA 3840
GTGACTGTGA GGATGAACCT TCATACCCTT TCCAAGACGT GTTACACAGA CAGACCTTTT 3900
TAAGTCCTGG ACTTTTAAAT GACCATGAAG TTATCATTGA ATGTTAAGAT TTTTTCTTCT 3960
TGATTTTTTA ATACACGTAA TCTTTTTGAA GCAGACATTG TATACAGAAT CTTACTTCTC 4020
TTTGTTCCTG ATATATTAAA ATGGCCAGTT AGGCTCTTTT TGTAGTTGAA TTGTCTTCTA 4080
AAGAGATTGG ATGGCCTCTA AAGAGGTATG TGTATCTTTA TTTCAGATGT CACCCAGAGT 4140
AAATTATAAT TAGAAGTATA GCTAGAATGA GCCCCAAACC TTAGCCTCAT TTATTTTGTT 4200
CTGTTACATA AGTCATTTTC CCCTTAGAGT GCTTGAAGAA ATGCCACCTA CAGGTTGTGT 4260
ACTTTTCATA ATGGTTTCCA TGAATGTAGT ACGTTCATAC AGGCTTCATT CAACCTGGCG 4320
TTCCCCTCCA TAATTAAGAT GAAACATTCC GGTTTTCTCA CAACACATTA GCACATACTG 4380
TCCATTAGCA TATCTGGGAT AACCAGGTTT TGGGGGTTGA GTTTTGGCCT TCATCCTTGT 4440
AGATCCCTTT CCTATTGATT TCCCACCTTC CAGTGAAATT CTGAAAGTCT TATCTTAAAA 4500
ATCGATCCGC TTACCATGGG CCTATTCTTG TAAGTTTCAG TTAGCATTTG CATGTGTAAT 4560
ATTAAAATGA AAGAGCTTCT TACCCAGTGC TGTTGCCCTT TTGAGTATTT TTGTTTTTAA 4620
AATAATGATT GTAAAATGTT TTACAAGTAA TGTAAAAGCT AGTATCATTC TTACATACTT 4680
CTGTGTTTAA ATTTTCATTC TTACCAAAAC AGTTAACTCT TTCTTTCCAA TCAATTTATA 4740
CAAAAGAGGT CGCTCCAGCC CTACCACAGG TCTGACTGGC ACTGCCTTTT GTTTGCCCTT 4800
GAACAGGGCA GTGTTGTGGG GACTGCAAAA GAGAAAACGT CCAGGCGAGC CCAGTTGTCC 4860
TCGCCCACAG GGTCCTGCAG GCTCCATCAG TCACCGCTTT CTATGGCGTT TGTAGTTGTG 4920
TCTTTTAAGA AGTGAGTGTG ATTGTTTACT TGATAAATCA GCTCACTCTC TGGTGCTTTT 4980
TAGAGAAGTC CCTGATTCCT TCTTAAACTT GGAATGATAG ATGAAATTCA CACCCCTGCA 5040
GATCAGAAAA AACAAATAGA AGAAAATGAG GGTTACAGTA ACCTGTTGTC TTTATATAAC 5100
TTGCAACAAA CTAATTTATT TTTTTTTCCT TTTTTTGTTT TTGGTTTTTT ATGGTTTTTT 5160
AAGGAAAATA CTTTTCTCCT TTGAAGTTTT ACAGCTTTTT GTAAATGCGT CCTGATAATG 5220
ATTAGGAAAA TCGACCTTTT CATCCATGAT GACCATCCTC ATAGCTCAGA TCTCCTTTCA 5280
AAGTAGTGGC TTTCTGGATG GTAATTCCAT CTTAAGGTGT CAGAACTATT TTCAAATGCT 5340
GCCTTTGACA GTTCTTGGAA TTTTCTGATA TTAAGCAGTT CCATGCAAAT ATTCGTGTTT 5400
TATAAATAGC TCTCATAGTC TGCTCCATCT TGATAGTTAA GTGATTTCTG AAGCGTTTGT 5460
GTGTGTGTTG ATCAGGTTGT GTGATATTTT TGCTTGATAG AGAATCAAAT TTGAAACAAT 5520
TAACCAGCCA GTAGATTGTC TGTCAGTGAC CTTCTGTAGT AATAAAGTTT TTGCCACTGT 5580
AAATAAAAAC AGTATCCGTA GCTATCAGGA TCATTGCGCA CTCATATATG CTAAGCCTTC 5640
TGTTCTCTAA TAGAAGCCTT TCTTTTCCAT TGTTTCTGGA TATTTGTATT ATCCAAATGT 5700
GCTTATTTCT TTGCCTTAGC ACACGTTTTA TGGAGTACTT GTTATACTAG GTTTGATTTG 5760
AAACTGGTGC TTGTCGCAGA ACTGTCAGAG CATGAGGAGC GCTCCTCCTG TGGGTGGACG 5820
CATTCACGCA CTCCCAGGTT GCACCTGCTG CTGGCGGTGA GCAGGGGGTT CAGCAGCTTG 5880
ACCGATGCCC CCCGAGGGGG CTCTCCCCAG CTTAAACTTT GTTGTTTAAA TTTGTTAACT 5940
TTTTATATTA ATGACTATTG AAAGTGGTAA TAAAAATTTA TATTATAGGC TTCAATGTTT 6000
TCATGAATGT TACCCAAAAA GCTGTGTTTT CTTTGGTCAG AGGTCAAAAT TTATGAAAAA 6060
CAAAATGCTG TATGAATGGA AATCATTTTG CAATTGAGTG ACACTTCATT GTAATTCACA 6120
GTGTAAATTT AATCCAAACT GAAATTTTGT TTCAACTGAA TTTGTAATTA ACTCTGAATT 6180
TGTTTTTAAT CATTAGTAAT ATTTCAGTTG GGTATCTTTT TAAGTAAAAA CAACAAATAA 6240
ACTCTGTACA TGTAAAACGT G 6261
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans28.47 6.70e-15 80.49
CGD-MuM-021078Mus musculus (Mouse)53.88 0.00e+00 1077
CGD-OvA-022195Ovis aries55.36 0.00e+00 1167.5
CGD-RaN-021797Rattus norvegicus56.11 0.00e+00 1149