CGDB Gene Information

Tag Content
CGDB ID CGD-SaH-047243
Ensembl Accession ENSSHAP00000018193.1
Protein Name PER3
Ensembl Information ENSSHAG00000015444; ENSSHAT00000018343
Organism Sarcophilus harrisii
NCBI Taxa ID 9305
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
ZT 12 ZT 0 LD >10 Predicted from orthologs Q65ZG8
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Descriptionperiod circadian clock 3 [Source:HGNC Symbol;Acc:HGNC:8847](View all)
Protein Sequence
(Fasta)		 MQSSKSDSND SNGNEFNEPE SSGTDSLNKE SHERWNKDFR RQGKDSTDNN SEQQDRNKTS 60
EELMMVVREM KKYFPSEKNH KPSILDALNY ALRCVHSVQA NNEFFQILGP NGAHQTDVTK 120
YSLEELVTIA SEHTSKNTDT FVAVFSFLSG KLVHVSEQAP LILNCKKNSL ASSPFVELLA 180
PQDVRVFCTH TAQAHLPFWN VSTQTASQYE YSQVKPFFCR IRGGKDREHE ALYYPFRITP 240
YMINVHSSAD TESEPCCLAL VEKIHSGYEA PRIPVNKRIF TTTHTPGCVF LEVDERAVPL 300
LGYLPQDLIG TSVLMYLHPE DRPLMFAVHQ KILKYAGQPP FEHSPIRFCT QNGDYVVLDS 360
SWSSFVNPWS RKVSFIIGRH KVRTSPLNED VFATRIKKMS SIDKDIMELQ DQIYKLLLQP 420
VHIGGSSGYG SLGSNGSQEH YISIASSSES SGNCVEEMQK EPMTLQQVCA TVNQIKNVGQ 480
QLYIESRTKV SNQQQFAGSE SRGGDKKSSH PSSQELRNGS LGTDSCDDLR KDQHIPSYQQ 540
INCVDSIIRY LKSYNIPALK RKCISCTNTT SSSSEEDQHI SQRPAGAQAL DAFPQIPVLD 600
TPVGTEDDRP ALALSPKAMS VLSTTSQCSY RSTLVHVPHP ESERVNRGLL PYSMMTVASN 660
FLVPEGFRQL GLTKAVLSAH TQKEEKNYVD RFREKILSSP YCSYLQPDGK SRPHYPLVPG 720
EAASKQMPSA SGKKGRHKRL KLPASSHNSG SWENSLPLGR PPWPPADVAS PSAPSLLAGF 780
PVLPSVSPVG AQCPALMPGL RPQPGPNPSC RVPPLLAFPS PYMGAFMTIV LHSPPACPQM 840
CPPFSSPCPF LSVPGCAEAA PVPPPSPPVL PQEPPPELPS LASSQRSAKE EWALQSEQEH 900
PLFSHSRSSS PLQLNLLQEE MPGATEPPLP ALGQEAEAGA QHDSVVGAGS AALGSGSVSS 960
EAMGSLPHDM SGCGTGSNDS SRYFASSDYS SETSQNEQKS EEKEAPHKSG RDAVWGMIEQ 1020
TPESILMTYQ VPERVREDVL KEDLEKLESM RQQQPRFTDG QKEELAEVHP WIQSQGVPRE 1080
TGSPVSSPES YRRGGDPLPR WGEGRDGPGL PHCPPAAGRR
Nucleotide Sequence
(Fasta)		 CCCTACGAGG TCACAGAGTC AAACACGGCC GAGACGGATG TGTGCGCCTC CTGGCAAGGC 60
GCTTCCCCTC GCATGCTCCC GGGCAGCTCT CCTGACCGCT GCCCCGTGCT CCCTGCCTGC 120
CTTCTGGCGC TCCTCCAGTG AAACCACAGG CCCTGGGCCT GTCCGCCAGC AGTGGTGGCC 180
CCCCGGCCCC CTGGAAGCAG GGGATGGTTT TCTGTTCCAT CTTTGTCTGC CCAGCTTCTG 240
GCACAGTGCC ATAGGAGGTG CTCGGTAGGC AATGGCTACA GAGGCATCGC TGCTGTGATG 300
AGCACTGAAT TGGGAGCTAA GCCGTCTGGG TTCAAACCTA ACTCCTATTG GAAGAAGGCA 360
TTCTGGTCCA AGGGACAGGA GGCTGGATTT GGGGCTGGCA CTTGGGTTTG AATCCAAGGC 420
CTGCTTTTTA CTACTGAGAT GACCTGAGCC CTGAAAGTGC TCATTTCTTG GGGCTTTAAT 480
TCCTTCATCT ATGAAGTGGA TTGGATCAGA TGCCTTTTAA GGTCCTTTTA GCTCCAGGAT 540
CTCACAAGCC TACAAAGTTG AAAGCTTGCT AATGTCTCTC AGAGAAACCA CTGACATTTT 600
CATCTTGGTT TCAGGTATTA AACTCATGCT TTACTTCCCA CCTTTTCATT TTTCTTTTTT 660
TTTTTTTTCA GATTGAAGTC TAATGTTACA CTTCAGTGAA ATGATAAGAT GCTGAAGTTC 720
TTTATTATGG AAAATAGCAA GTATAGGAAA CATTGTTCCT TAGTAAATAG CAACAATTAA 780
TTACTTACAT CACATTTTGC CAATCAGCTG TGACAGAAAA TTTTATGTTA GATGATGGCT 840
GGGACCAAAA TGAGAACTGG AGCATCATCA CTGATGACTT CAAAATAGAA AACACATTTA 900
CGTAGAGCCA TCAATATTTA GAAGCCAGAG AAGAAAGTCC ATTGCAAAGA CCTAGAAATG 960
CAGAGCAGTA AATCCGATAG CAATGACTCC AACGGAAATG AATTTAATGA ACCAGAGTCC 1020
AGTGGGACGG ATTCCCTTAA TAAAGAATCC CATGAGAGGT GGAACAAAGA CTTCAGACGG 1080
CAAGGCAAAG ATAGCACTGA CAACAACAGT GAGCAGCAAG ATCGAAACAA GACTTCTGAA 1140
GAACTTATGA TGGTGGTCCG AGAAATGAAA AAGTACTTCC CCTCGGAGAA AAATCACAAG 1200
CCAAGTATTC TTGATGCCCT CAACTATGCC CTTCGCTGCG TACACAGTGT TCAAGCCAAC 1260
AATGAGTTTT TCCAGATTCT TGGACCAAAT GGAGCCCACC AAACAGACGT GACTAAGTAC 1320
AGCCTTGAGG AGCTGGTAAC CATCGCTTCA GAACACACCT CTAAAAACAC AGATACCTTT 1380
GTGGCAGTTT TTTCGTTTCT CTCCGGAAAG TTGGTACATG TTTCAGAGCA GGCCCCTCTC 1440
ATCCTGAACT GTAAGAAGAA TTCCCTTGCA TCCTCTCCAT TTGTTGAGCT GCTTGCCCCT 1500
CAAGACGTGA GAGTTTTCTG CACACATACA GCCCAGGCCC ATCTTCCGTT CTGGAATGTC 1560
AGCACCCAAA CAGCCTCCCA GTATGAATAT TCTCAAGTGA AACCCTTTTT CTGCAGGATC 1620
AGAGGAGGTA AAGACCGAGA ACACGAGGCC CTCTATTATC CATTCCGGAT CACCCCCTAT 1680
ATGATCAACG TACACAGCTC TGCTGACACG GAGTCGGAGC CCTGCTGCCT GGCTCTGGTT 1740
GAGAAGATTC ACTCTGGGTA TGAAGCTCCA CGGATCCCTG TGAATAAAAG GATCTTTACA 1800
ACAACCCATA CTCCAGGGTG TGTGTTTCTT GAAGTGGATG AAAGAGCTGT ACCTTTGCTG 1860
GGCTACCTCC CTCAGGATCT GATTGGAACC TCTGTCTTAA TGTACCTGCA TCCAGAAGAC 1920
CGTCCTCTGA TGTTTGCTGT GCATCAGAAA ATCTTGAAGT ATGCAGGCCA ACCTCCCTTT 1980
GAACATTCAC CCATTAGATT TTGCACTCAG AATGGAGATT ATGTCGTATT GGATTCCAGC 2040
TGGTCCAGCT TTGTGAATCC ATGGAGCCGC AAAGTTTCCT TCATCATTGG CCGACACAAA 2100
GTTCGAACGA GCCCACTAAA TGAAGATGTT TTTGCCACCA GAATCAAGAA AATGAGCAGT 2160
ATTGACAAAG ATATAATGGA ATTACAAGAT CAAATTTATA AACTTCTCTT ACAGCCAGTT 2220
CACATTGGTG GGTCCAGCGG CTATGGGAGC CTGGGCAGCA ATGGGTCGCA AGAACATTAC 2280
ATTAGCATCG CATCGTCCAG TGAATCTAGC GGCAATTGTG TGGAGGAAAT GCAGAAAGAG 2340
CCAATGACAT TGCAGCAGGT CTGCGCCACT GTCAACCAAA TTAAAAACGT GGGTCAGCAG 2400
CTGTACATTG AGTCAAGGAC CAAAGTATCA AACCAACAAC AGTTTGCAGG ATCAGAGAGC 2460
CGGGGAGGTG ACAAGAAGTC TTCTCATCCT TCATCTCAGG AGCTGAGAAA TGGTAGTTTG 2520
GGCACTGATT CTTGTGATGA TTTGAGAAAG GATCAGCACA TTCCATCCTA TCAACAGATC 2580
AATTGTGTGG ACAGTATTAT CAGGTATCTC AAGAGCTACA ACATCCCTGC CTTGAAGAGG 2640
AAGTGTATTT CCTGCACCAA TACGACTTCC TCCTCCTCTG AAGAAGACCA GCACATCAGT 2700
CAGAGACCAG CTGGTGCCCA GGCACTAGAC GCTTTTCCCC AGATTCCGGT CCTGGACACA 2760
CCTGTAGGGA CTGAAGATGA CCGCCCGGCG CTGGCACTTT CTCCCAAAGC CATGAGCGTG 2820
CTCTCCACCA CAAGCCAGTG CAGCTACCGC AGCACCCTGG TGCACGTCCC CCACCCAGAA 2880
TCAGAAAGGG TCAATCGAGG CCTTTTGCCA TACAGTATGA TGACTGTGGC TTCCAACTTC 2940
TTAGTCCCAG AGGGCTTCCG GCAGCTGGGG CTCACCAAGG CTGTGCTGTC TGCTCATACG 3000
CAAAAGGAGG AGAAGAACTA CGTGGACAGA TTTCGGGAAA AGATCCTATC TTCTCCATAT 3060
TGCTCCTACC TTCAGCCAGA TGGCAAAAGC AGGCCGCACT ATCCCCTCGT CCCAGGAGAA 3120
GCTGCTTCCA AGCAGATGCC ATCAGCCAGT GGTAAGAAGG GCAGGCACAA GCGTCTGAAA 3180
CTCCCCGCGT CCTCACACAA CAGTGGTTCC TGGGAGAACT CGCTGCCTCT AGGCAGACCG 3240
CCCTGGCCTC CAGCAGACGT GGCCTCTCCT TCGGCCCCTT CCCTTCTGGC CGGCTTCCCT 3300
GTCCTGCCAT CGGTGTCCCC TGTGGGAGCA CAGTGCCCAG CACTGATGCC CGGACTGAGA 3360
CCTCAGCCTG GGCCGAACCC TTCCTGCAGG GTGCCGCCAC TTCTGGCCTT CCCTTCTCCT 3420
TACATGGGTG CTTTTATGAC CATTGTCTTA CACAGCCCCC CTGCCTGCCC CCAGATGTGC 3480
CCACCATTCT CTTCCCCTTG TCCATTCCTG AGTGTGCCTG GTTGTGCTGA AGCAGCCCCG 3540
GTGCCGCCAC CCTCCCCGCC AGTGCTGCCA CAGGAGCCCC CTCCAGAGCT TCCGTCCCTG 3600
GCCTCCAGCC AGAGATCAGC CAAAGAAGAG TGGGCACTCC AGAGCGAGCA GGAGCACCCC 3660
TTATTTAGTC ATTCCCGAAG CAGCTCCCCA CTCCAGCTGA ATCTGCTGCA GGAGGAAATG 3720
CCGGGGGCCA CCGAGCCCCC CCTGCCAGCC CTGGGACAGG AGGCGGAGGC AGGAGCACAG 3780
CACGACTCTG TGGTGGGGGC CGGCTCTGCG GCGTTGGGGA GCGGGTCCGT GAGCTCCGAG 3840
GCCATGGGCT CACTCCCCCA CGACATGTCT GGTTGTGGCA CAGGAAGCAA TGATAGCAGC 3900
AGATACTTTG CAAGTAGCGA CTATTCCTCT GAAACCTCCC AAAATGAGCA GAAATCAGAG 3960
GAAAAAGAAG CACCCCACAA ATCAGGTAGA GATGCCGTCT GGGGGATGAT AGAGCAGACC 4020
CCCGAGAGCA TCTTGATGAC ATATCAGGTC CCTGAGAGGG TCAGAGAAGA TGTACTCAAA 4080
GAGGACCTGG AGAAGCTGGA AAGCATGAGG CAGCAGCAGC CTCGCTTTAC TGATGGACAG 4140
AAGGAGGAGT TGGCCGAAGT GCACCCCTGG ATTCAAAGCC AGGGGGTCCC TCGGGAAACA 4200
GGCTCCCCCG TAAGCAGCCC CGAGTCCTAC AGGCGAGGAG GGGACCCCCT GCCGAGGTGG 4260
GGAGAAGGTA GAGACGGGCC TGGCCTCCCA CACTGTCCTC CAGCGGCAGG GAGAAGGTAG 4320
AGACCTTGGC CAACCAGGCG GCTCCCCCTT CTATTGGGGG AGCACATCCA AGTGTGCCAG 4380
CCTGGTTACT CTGGGGGGCT TTTTAAATGA ACAGGCCTTG GGGGGCTCTC NNNNNNNNNN 4440
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NN 4492
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-CaE-021686Caenorhabditis elegans29.27 1.80e-14 78.95
CGD-MuM-021078Mus musculus (Mouse)51.12 0.00e+00 936.8
CGD-OvA-022195Ovis aries47.86 0.00e+00 921.8
CGD-RaN-021797Rattus norvegicus51.13 0.00e+00 959.1
Gene Ontology

GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression
GO:0006355--regulation of transcription, DNA-templated