CGDB Gene Information


Tag Content
CGDB ID CGD-TaR-050668
Ensembl Accession ENSTRUP00000036868.1
Protein Name per1a
Ensembl Information ENSTRUG00000014420; ENSTRUT00000037000
Organism Takifugu rubripes
NCBI Taxa ID 31033
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
Descriptionperiod circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all)
Protein Sequence
(Fasta)
SSGNDSGERE SEGGMERETH GRESTRSSRS GKDSGLMLET TESNKSSNSQ SLSPPSGSLA 60
YSLLSNSTEQ DLPSTSGCSS NQSARVQTQK ELMKAIKELK LRLPSERKAK GHSSTLNALK 120
YALQCVKQVR ANKEYYHQWS VEECHGCSLD LSAFTIEELD NITSEYTLKN TDTFSIAVSF 180
LSGKVVYVSP QGSSLLRCKP EYLQGTVFSE LLAPQDVSTF YSGTAPCRLP PWASCIGSVS 240
TSVDYTQEKS MFCRISADRT QGGEMRYCPY RLTPYQLTIK DSDAAEPQPC CLLIAERVHS 300
GYEAPRIPPD KRIFTTSHTP SCLFQEVDER AVPLLGYLPQ DLVGTPTLLH IHPDDRPMMV 360
AIHEKIFQFA GQPFEYAPLR MCARNGEYLT IDTSWSSFVN PWSRKVAFIV GRHKVRTSPL 420
NEDVFAAPPG YESRVTTPDV IQLSEQIHRI LAQPVHNGGS QGYSSLGSSG SRDSRRSHQQ 480
HLSAASSSDS NGPAMDEAAA VVALHKPMTF QQICKDVHMV KTNGQQMFIE SRNRPPPRKN 540
SAGPTNVTAV HSDPIRRLIA DAMKPPRALA PAPLVQKEAH TGYSYQQINC LDSIIRYLDS 600
CNIPNTVKRK CGSSSCTSTS DEDRQEANGN KGAFTRDALT SAVDLVGEPP SLPPLTMATK 660
AESVASITSQ CSFSSTIVHV GDKKPPESDI VMEDAPTIAP PLPPPPSPLP AAPASAQTER 720
DGRRSGGAGG RMGLTKEVLS AHTQQEEQAF LDRFKDLSKL RVFDQTASSA LRLQPPAANP 780
LSRGECSSRP NPESTRHSSL GPSRSHVDPR TSTAPIPLSL PLGPLTNSSS WASVGSQASM 840
PAAPFPPGML PIYPVYPPIT QPFPQPVPDP SRFPPAQMLP PMMAFVLPNY MFPRAPTPDS 900
STIPTCHSPS PPPRPAPPPP SPTPYQNPAE REGAESPLFQ SRCSSPLNLL QLEESPSNRL 960
EAATALAAPQ QATPSAQGAA AGGQSPANQG ETNESNQDAM STSSDLLDLL LQEDSRSGTG 1020
SAASGSGSSG TRSSGSGSGS NGCSSSGTSG TSSSQGSHTS KYFGSIDSSE NDHSRKQPAG 1080
GSSSAGGEGE EQFIKCVLQD PIWLLMANTD DKVMMTYQLP VRDMETVLRE DREALRSMQK 1140
HQPRFTEEQK RELSQMHPWV RTGRLPRAIN ISGCKGCTSP SVAPPADPFD VEIHEMEQCG 1200
VLNAPEDGGK PGDAGGGGGE
Nucleotide Sequence
(Fasta)
TCCAGCGGGA ACGACTCGGG TGAGAGGGAA AGCGAAGGCG GGATGGAGAG GGAGACCCAC 60
GGACGCGAAT CCACTCGCAG CTCCCGCAGC GGCAAGGACT CCGGTCTGAT GCTGGAAACC 120
ACAGAGAGCA ACAAAAGCTC CAACTCCCAA AGCCTGTCGC CCCCTAGCGG CTCCCTGGCG 180
TACAGCCTGC TGTCCAACAG CACGGAGCAG GACCTGCCCT CCACCTCCGG CTGCAGCAGC 240
AACCAGTCAG CCAGGGTCCA GACCCAGAAG GAGCTGATGA AGGCCATCAA AGAGCTGAAG 300
CTGCGTCTCC CCTCCGAGCG CAAGGCAAAG GGCCACTCCA GCACCCTCAA CGCACTCAAA 360
TACGCCCTCC AGTGTGTCAA ACAAGTCCGA GCCAACAAGG AGTACTACCA CCAGTGGAGC 420
GTGGAGGAGT GCCACGGCTG CAGCCTGGAC CTGTCGGCGT TCACAATCGA GGAGCTGGAC 480
AACATCACCT CGGAGTACAC CCTGAAAAAC ACCGACACCT TCTCCATAGC CGTGTCGTTC 540
CTGTCCGGGA AGGTCGTGTA CGTGTCGCCC CAGGGGTCGT CCCTCCTGCG CTGCAAGCCC 600
GAGTATCTCC AGGGAACTGT GTTTTCGGAG CTCCTGGCGC CGCAGGACGT CAGCACCTTC 660
TACAGCGGCA CGGCGCCCTG CCGCCTGCCG CCCTGGGCTT CCTGCATCGG CTCCGTGTCC 720
ACTTCTGTCG ACTACACTCA GGAGAAGTCC ATGTTCTGCC GGATCAGCGC CGACCGGACG 780
CAGGGCGGCG AGATGCGCTA CTGCCCCTAT CGCCTCACGC CGTACCAGCT GACCATCAAA 840
GACTCGGACG CCGCCGAGCC GCAGCCGTGC TGCCTGCTCA TCGCTGAACG GGTCCACTCC 900
GGATACGAAG CTCCTCGTAT CCCTCCTGAC AAGAGAATCT TCACCACCAG CCACACTCCC 960
AGCTGCCTCT TCCAGGAAGT TGACGAAAGG GCGGTGCCGC TGCTGGGCTA CCTGCCTCAG 1020
GACCTGGTGG GGACGCCGAC GCTGCTCCAC ATCCACCCCG ACGACAGGCC CATGATGGTG 1080
GCGATACACG AGAAGATCTT TCAGTTCGCC GGGCAGCCGT TTGAATACGC ACCGTTGAGG 1140
ATGTGCGCCC GCAACGGGGA ATATCTGACC ATCGACACCA GCTGGTCTTC CTTTGTCAAC 1200
CCCTGGAGCC GCAAGGTCGC GTTCATCGTG GGCCGCCACA AAGTCCGAAC GAGTCCTCTG 1260
AATGAAGACG TGTTTGCGGC GCCGCCGGGA TACGAGAGCC GGGTCACGAC GCCGGACGTC 1320
ATCCAGCTGA GCGAGCAGAT CCACCGGATC CTGGCTCAGC CTGTGCACAA CGGCGGCTCC 1380
CAGGGATACA GCTCGCTGGG CTCCAGCGGC TCCAGAGACT CTCGCCGGTC GCACCAGCAG 1440
CACCTCAGCG CCGCCTCGTC CAGCGACAGC AACGGCCCGG CCATGGACGA GGCCGCCGCC 1500
GTGGTGGCTC TGCACAAACC GATGACGTTC CAGCAAATCT GCAAAGACGT CCACATGGTG 1560
AAGACGAACG GACAGCAGAT GTTTATCGAG TCCCGTAACC GGCCGCCGCC CAGAAAGAAC 1620
AGCGCAGGTC CAACAAACGT CACAGCGGTT CACAGCGACC CGATCAGGAG ACTGATAGCG 1680
GACGCGATGA AACCGCCCCG CGCTTTGGCC CCCGCGCCGC TGGTGCAGAA GGAGGCGCAC 1740
ACGGGCTACT CCTACCAGCA GATCAACTGC CTGGACAGCA TCATCAGGTA CTTGGACAGC 1800
TGCAACATTC CCAACACGGT CAAACGCAAG TGTGGCTCCT CCTCCTGCAC CTCCACCTCC 1860
GATGAAGACA GACAGGAGGC CAACGGCAAC AAGGGTGCGT TCACACGCGA TGCTCTCACC 1920
TCCGCAGTGG ATCTCGTGGG CGAACCGCCG TCCCTGCCTC CGCTGACCAT GGCCACCAAG 1980
GCGGAGAGCG TGGCTTCCAT CACCTCGCAG TGCAGCTTCA GCAGCACCAT CGTGCACGTG 2040
GGAGACAAGA AGCCTCCTGA GTCAGACATT GTTATGGAGG ATGCGCCCAC CATCGCGCCG 2100
CCGCTGCCGC CTCCTCCTTC CCCCCTTCCC GCTGCTCCGG CCTCGGCTCA GACGGAGCGA 2160
GACGGCCGGA GGAGCGGCGG CGCTGGGGGC CGGATGGGTC TGACGAAGGA GGTGCTGTCC 2220
GCCCACACGC AGCAGGAGGA GCAGGCCTTC CTCGACCGCT TCAAGGACCT CAGCAAGCTG 2280
CGGGTGTTCG ACCAGACGGC ATCTTCGGCT CTGAGGCTGC AGCCCCCCGC CGCCAACCCT 2340
CTGTCGCGAG GTGAGTGTTC GTCACGGCCG AACCCTGAAA GCACGAGACA CAGCTCTCTG 2400
GGCCCGAGCA GGAGCCACGT GGACCCCAGA ACCAGCACGG CTCCCATCCC CCTCAGCTTG 2460
CCTCTGGGGC CCCTGACAAA CTCCTCCTCC TGGGCATCTG TTGGATCCCA GGCCAGCATG 2520
CCTGCTGCCC CCTTCCCTCC CGGGATGCTC CCAATATACC CAGTTTACCC ACCGATCACG 2580
CAGCCCTTCC CTCAGCCGGT CCCGGATCCA TCACGCTTCC CTCCTGCCCA GATGTTGCCC 2640
CCCATGATGG CCTTTGTTCT GCCCAACTAC ATGTTCCCCA GGGCGCCAAC CCCGGACAGT 2700
TCTACAATCC CAACATGCCA CAGCCCGTCA CCGCCGCCGC GCCCGGCGCC CCCGCCACCG 2760
TCCCCAACCC CGTACCAGAA CCCGGCCGAA CGCGAAGGCG CCGAGTCCCC GCTCTTCCAG 2820
TCCCGCTGCT CCTCCCCTCT CAACCTGCTG CAGCTGGAGG AATCGCCCAG CAACCGTCTG 2880
GAGGCCGCCA CGGCTCTGGC GGCCCCCCAG CAAGCCACGC CTTCTGCGCA GGGCGCCGCC 2940
GCCGGGGGGC AGAGCCCGGC CAACCAGGGT GAAACTAACG AGTCCAACCA GGACGCCATG 3000
TCCACCTCCA GCGACCTGCT GGACCTGCTG CTGCAGGAAG ACTCCCGCTC CGGCACCGGC 3060
TCAGCCGCCT CCGGCTCCGG GTCCTCAGGC ACCAGGTCCT CCGGCTCCGG CTCCGGCTCC 3120
AACGGCTGCA GCTCCTCTGG GACCAGCGGC ACCAGCAGCA GCCAGGGGAG CCACACCAGC 3180
AAGTACTTCG GGAGCATCGA CTCCTCGGAG AACGACCATT CCCGCAAGCA GCCAGCAGGG 3240
GGCAGCAGCA GCGCTGGCGG GGAAGGCGAG GAGCAGTTCA TCAAGTGTGT CCTGCAGGAC 3300
CCCATCTGGC TGCTGATGGC CAACACCGAC GACAAGGTCA TGATGACCTA CCAACTTCCT 3360
GTCAGGGACA TGGAGACAGT CCTGCGTGAG GACCGCGAGG CCCTGAGGAG CATGCAGAAG 3420
CACCAACCCC GGTTCACGGA GGAGCAGAAG AGGGAGTTGA GCCAGATGCA CCCCTGGGTC 3480
CGCACCGGAC GCCTCCCCCG CGCCATCAAC ATCTCGGGCT GCAAAGGCTG CACGTCCCCC 3540
TCGGTCGCGC CCCCCGCCGA CCCCTTCGAC GTGGAGATCC ACGAGATGGA GCAGTGCGGC 3600
GTGCTGAACG CGCCGGAGGA CGGCGGCAAA CCAGGAGATG CCGGCGGAGG AGGCGGAGAA 3660
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus45.43 0.00e+00 909.4
CGD-HoS-021038Homo sapiens (Human)45.19 0.00e+00 921.4
CGD-OvA-022197Ovis aries45 0.00e+00 891.7
Gene Ontology

GO:0005515--protein binding