CGDB Gene Information

Tag Content
CGDB ID CGD-CaJ-048018
Ensembl Accession ENSCJAP00000026840.2
Protein Name PER1
Ensembl Information ENSCJAG00000014556; ENSCJAT00000028370
Organism Callithrix jacchus
NCBI Taxa ID 9483
Circadian Information
Phase Amplitude
(FOLD)		 Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 4 ZT 21 LD 2 human HaCaT keratinocytes Predicted from orthologs O15534
CT 0 CT 12 DD2 4 U2OS cells Predicted from orthologs O15534
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionperiod circadian clock 1 [Source:HGNC Symbol;Acc:HGNC:8845](View all)
Protein Sequence
(Fasta)		 MSGPLEGADG GGDPSPGESF CPGGVPSPGP PQHRPCPGPS LADDTDANSN GSSGNESNGH 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCSMDMSTY TLEELEHITS EYTLRNQDTF SVAVSFLTGR IVYISEQAAI 240
LLRCKRDVFR GTRFSELLAP QDVGVFYGST APSRLPTWGT GASAGSGLRD FTQEKSVFCR 300
IRGGPDRDLG PRYQPFRLTP YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF 360
TTRHTPSCLF QDVDERAAPL LGYLPQDLLG APVLLFLHPE DRPLMLAIHK KILQLAGQPF 420
DHSPIRFCAR NGEYVTMDTS WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPVL 480
PLDTDIQELS EQIHRLLLQP VHSPSSTGFS GVGPMTSPGP LHSPGSSSDS NGGDAEGPGP 540
PAPVTFQQIC KDVHLVKHQG QQLFIESRAW PQPRTRLPAT GTFKAKTLPC QSPDPELETG 600
PAPIQAPLAL APEEAERKEA SSSSYQQINC LDSILRYLES CNIPSTTKRK CASSSSYTTS 660
SASDDDKQRT GPVPVGTKKD PPSAVLSGEG ATPRKEPVVG GTLSPLTLAN KAESVVSATS 720
QCSFSSTIVH VGDKKLPESD IIMMEDLPGL APGPAPSPAP SPTVAPDPAP DAYRPVGLTK 780
AVLSLHTQKE EQAFLSRFRD LGRLRGLDSS STAPSALVSE TGCHHSPAPQ SRRHHCRSKA 840
KRSRHHQNPR AETPCYVSHP SPVPPSTPWP PPPATTPFPA VVQPYPLQVF SPRGGPQPLP 900
PAPTSVPQAA FPTPLVTPMV ALVLPNYLFP TSSSYPYGAP QTPAEGPATA SHSPSPSLPA 960
LPPSPPRGPD SPLFNSRCSS PLQLNLLQLE ESPRAEGAAV AGGPGSSAGP PPPNEKAAEP 1020
EARLVEVTES SNQDALSGSS DLLELLLQED SRSGTGSAAS GSLGSGLGSG SGSGSHEGCS 1080
TSASITRSSQ SSHTSKYFGS IDSSEAEAGA ARAEAEPGDQ VIKYVLQDPI WLLMANADQR 1140
VMMTYQVPSR DMTSVLKQDR ERLRAMQKQQ PRFSEDQRRE LGAVHSWVRK GQLPRALDVM 1200
ACVDCGSSTQ DPGHPDDPLF ELDGLGLEPM EEGGGEQGSS GGGSGEGEGC EEAGAQVGAK 1260
ASSSQDLAME EEEEGRSSAS PALPTAGNSA S 1291
Nucleotide Sequence
(Fasta)		 ATTATGCAAC CCGCCTCCCC GCCCAGCGGA GCTTCCACTC GGCTGCGGGC TGGAGCGGCG 60
GCGGGCAGGC AGACGGAGGA CACCCCTACG ACCAGGTACC GGCTGTGATC GAACTTCTCA 120
ATCCTCAGAG ACTTAGATCT TCCACCTCAT TCCCGCAGCC AGGCCTCCAG GCCCCCTCCT 180
GCATCCGTGG TGGCCTCTCC GCTTTCCCTG TTCTGTTCTC CCCATGGCCT AGACATGAGT 240
GGCCCTCTAG AAGGGGCGGA TGGAGGAGGG GACCCCAGTC CTGGAGAATC CTTTTGTCCT 300
GGAGGGGTCC CATCCCCTGG GCCTCCACAG CACCGGCCTT GCCCAGGCCC CAGCCTGGCT 360
GATGACACCG ATGCCAACAG CAATGGTTCA AGCGGCAATG AGTCCAATGG GCATGAGTCC 420
AGGGGTGCGT CTCAACGGAG CTCACACAGC TCCTCCTCAG GCAACGGCAA GGACTCAGCC 480
CTGCTGGAGA CCACTGAAAG CAGCAAGAGC ACAAACTCTC AGAGCCCATC CCCACCCAGC 540
AGTTCCATCG CCTACAGCCT CCTGAGTGCC AGCTCAGAGC AGGACAATCC ATCCACCAGT 600
GGCTGCAGCA GTGAACAGTC AGCCCGGGCA AGGACCCAGA AGGAACTCAT GACAGCACTT 660
CGAGAGCTCA AGCTTCGACT CCCGCCAGAG CGCCGGGGCA AGGGCCGCTC TGGGACCCTG 720
GCCACACTGC AGTACGCATT GGCCTGTGTC AAGCAGGTGC AGGCCAACCA GGAATACTAC 780
CAGCAGTGGA GTCTGGAGGA GGGCGAGCCT TGCTCCATGG ACATGTCCAC CTACACATTG 840
GAGGAGCTGG AGCACATCAC GTCTGAGTAC ACACTTCGTA ACCAGGATAC CTTCTCGGTG 900
GCTGTTTCCT TCCTGACGGG CCGAATTGTG TACATTTCGG AGCAGGCAGC CATCCTGCTG 960
CGTTGCAAGC GAGACGTGTT CCGGGGTACC CGCTTCTCCG AGCTCCTGGC TCCCCAGGAT 1020
GTGGGAGTTT TCTATGGTTC CACTGCTCCG TCTCGCCTGC CCACCTGGGG CACTGGGGCC 1080
TCTGCAGGTT CAGGCCTCAG GGACTTCACC CAGGAGAAGT CTGTTTTCTG TCGTATCAGG 1140
GGAGGTCCTG ACCGGGACCT AGGGCCTCGG TACCAGCCAT TCCGCCTTAC CCCATATGTG 1200
ACCAAGATCC GGGTCTCAGA TGGGGCGCCT GCACAGCCAT GCTGCCTGCT CATTGCAGAA 1260
CGCATCCACT CGGGTTACGA AGCTCCTCGG ATACCTCCTG ACAAGAGGAT TTTCACTACG 1320
AGGCACACAC CCAGCTGCCT CTTCCAGGAT GTAGATGAAA GGGCTGCCCC ACTGCTGGGC 1380
TACCTGCCCC AGGACCTCCT GGGGGCCCCC GTGCTCCTGT TCCTGCATCC TGAAGACCGA 1440
CCTCTCATGC TGGCTATCCA CAAGAAGATC CTGCAGTTGG CGGGCCAGCC CTTTGACCAC 1500
TCCCCTATCC GCTTCTGTGC CCGCAACGGG GAATATGTCA CCATGGACAC TAGCTGGGCT 1560
GGTTTTGTGC ACCCCTGGAG CCGCAAGGTA GCCTTCGTGT TGGGCCGCCA CAAAGTTCGC 1620
ACGGCTCCCC TCAATGAGGA CGTGTTCACT CCCCCGGCCC CCAGCCCAGT TCTGCCCCTG 1680
GACACTGATA TCCAGGAGCT GTCAGAGCAG ATCCACCGGC TGCTGCTGCA GCCTGTGCAC 1740
AGCCCCAGCT CCACAGGCTT CTCTGGAGTT GGCCCTATGA CATCCCCAGG CCCTCTCCAC 1800
AGCCCTGGCT CCTCCAGTGA TAGCAACGGG GGTGATGCAG AGGGACCTGG GCCTCCTGCA 1860
CCAGTGACTT TCCAGCAGAT CTGTAAGGAT GTGCATCTGG TGAAGCACCA GGGGCAGCAG 1920
CTCTTTATTG AGTCTCGGGC CTGGCCTCAG CCCCGGACCC GCCTCCCTGC TACAGGCACA 1980
TTCAAGGCCA AGACCCTTCC CTGCCAATCC CCAGACCCAG AGCTGGAGAC AGGTCCTGCT 2040
CCCATCCAGG CCCCACTAGC CTTGGCCCCT GAGGAGGCCG AGAGGAAAGA GGCCTCCAGC 2100
TCCTCCTACC AACAGATCAA CTGCCTGGAC AGCATCCTCA GGTACCTGGA GAGCTGCAAC 2160
ATCCCCAGCA CCACCAAGCG TAAATGTGCC TCCTCCTCCT CCTACACCAC CTCCTCAGCA 2220
TCTGATGATG ACAAGCAAAG GACAGGCCCA GTCCCTGTGG GGACCAAGAA AGATCCGCCG 2280
TCAGCAGTGC TGTCTGGGGA GGGGGCCACT CCACGGAAGG AGCCAGTGGT GGGAGGCACC 2340
CTGAGCCCGC TCACCCTGGC CAATAAGGCG GAGAGCGTGG TGTCCGCCAC AAGTCAGTGT 2400
AGCTTCAGCT CCACCATCGT CCATGTGGGA GACAAGAAGC TCCCGGAGTC GGACATCATC 2460
ATGATGGAGG ACCTGCCTGG CCTAGCCCCA GGCCCAGCCC CCAGCCCAGC CCCCAGCCCC 2520
ACAGTAGCCC CTGACCCAGC CCCAGATGCC TACCGTCCAG TGGGGCTGAC CAAGGCCGTG 2580
CTGTCCCTGC ACACACAGAA GGAAGAGCAA GCCTTCCTCA GCCGCTTCCG AGACCTGGGC 2640
AGGCTGCGTG GACTGGACAG CTCTTCCACA GCCCCTTCTG CCCTGGTGAG CGAGACAGGC 2700
TGCCACCACA GCCCTGCACC CCAAAGCCGC AGACACCACT GCCGATCCAA AGCCAAGCGC 2760
TCACGCCACC ACCAGAACCC CCGGGCTGAA ACCCCCTGCT ATGTCTCACA CCCCTCACCT 2820
GTACCACCCT CCACCCCCTG GCCCCCCCCA CCAGCCACTA CCCCCTTCCC AGCAGTTGTC 2880
CAGCCCTACC CTCTCCAAGT GTTCTCCCCG AGAGGAGGCC CCCAGCCTCT TCCCCCGGCT 2940
CCCACATCTG TGCCCCAGGC TGCTTTCCCC ACCCCTCTGG TGACCCCAAT GGTGGCCTTG 3000
GTTCTCCCAA ACTATCTGTT CCCAACCTCA TCCAGCTATC CTTATGGGGC TCCCCAGACC 3060
CCTGCTGAAG GACCCGCTAC TGCCTCGCAC TCCCCTTCTC CATCCTTGCC CGCCCTCCCC 3120
CCCAGCCCTC CCCGAGGCCC AGACTCTCCA CTGTTCAACT CAAGATGCAG CTCTCCACTC 3180
CAGCTCAATC TGCTGCAGCT TGAGGAGTCC CCCCGTGCTG AGGGGGCTGC CGTTGCAGGG 3240
GGCCCTGGGA GCAGTGCTGG CCCTCCACCT CCCAATGAGA AGGCTGCTGA GCCAGAGGCC 3300
AGACTGGTGG AGGTCACAGA GTCCTCCAAT CAGGACGCGC TTTCCGGCTC CAGTGACCTG 3360
CTGGAGCTGC TGCTGCAAGA GGACTCACGC TCTGGCACAG GCTCCGCAGC CTCGGGCTCC 3420
TTAGGCTCCG GCTTGGGCTC TGGGTCTGGT TCAGGCTCCC ATGAGGGGTG CAGCACCTCA 3480
GCCAGCATCA CTCGCAGCAG CCAGAGCAGC CATACAAGCA AATACTTTGG CAGCATTGAC 3540
TCTTCCGAGG CAGAGGCTGG GGCTGCTCGG GCGGAGGCTG AGCCCGGGGA CCAGGTGATT 3600
AAGTACGTGC TCCAGGATCC CATTTGGCTG CTTATGGCCA ATGCTGATCA GCGTGTCATG 3660
ATGACCTACC AGGTGCCCTC CAGGGATATG ACCTCTGTAC TGAAGCAGGA TCGGGAGCGG 3720
CTCCGAGCCA TGCAGAAGCA GCAGCCTCGG TTTTCAGAGG ACCAGCGGCG GGAACTGGGC 3780
GCTGTGCACT CCTGGGTCCG GAAGGGCCAG CTGCCTCGGG CTCTTGATGT GATGGCCTGT 3840
GTGGACTGTG GGAGCAGCAC CCAAGACCCT GGTCACCCTG ATGACCCACT CTTCGAGCTG 3900
GATGGACTGG GGCTGGAGCC CATGGAGGAG GGTGGAGGCG AGCAAGGCAG CAGTGGTGGC 3960
GGCAGTGGTG AGGGTGAGGG CTGCGAGGAG GCCGGGGCCC AAGTTGGGGC CAAGGCCTCT 4020
AGCTCTCAGG ACTTGGCCAT GGAGGAGGAG GAGGAAGGAA GGAGCTCGGC CAGTCCAGCC 4080
TTACCTACAG CAGGAAACAG CGCCAGCTAG ACTCCATTTT GGGACCATCT CCAGGAGCCC 4140
ATGAGCAGCT TCCTTCTGTG TCCCAATTCT CAGAACTCAG ATGTGGCTGG ACCAACCAGT 4200
GGGAAACTGC CGCAGCTTCT CCCACCATAG GGGGCCGGAC CCCCATCACC AGCCCAGGAT 4260
CCAAGGGCTG CCTCTGGCCT CTTAGGGAAC AGAGAGTAGA ACTCTGCAGC CCAACCCAGA 4320
GGAGGGTCCC CTCCTACCTT TGGAGTGGAG CCCTTCCCTC TCCTGGACAG AGTTGCTGAC 4380
AAGCTGCTGA AGTGGTCCCT CCATATCCCA GCTGAGCCTG A 4421
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus62.67 0.00e+00 1484.2
CGD-HoS-021038Homo sapiens (Human)65.48 0.00e+00 1576.6
CGD-OvA-022197Ovis aries61.13 0.00e+00 1442.2
CGD-RaN-021793Rattus norvegicus64.05 0.00e+00 1465.7
Gene Ontology

GO:0005515--protein binding