CGDB Gene Information


Tag Content
CGDB ID CGD-MeL-041695
Ensembl Accession EGG10479
Ensembl Information MELLADRAFT_93467; EGG10479
Organism Melampsora laricipopulina
NCBI Taxa ID 747676
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
CT 0 CT 12 DD2 5.8 gluteal muscles Predicted from orthologs F7AU00
ZT 0 ZT 12 LD 2 muscle Predicted from orthologs W5QC67
ZT 4 ZT 0 LD 5 SCN Predicted from orthologs W5QC67
ZT 12 ZT 0 LD 30 abdominal adipose tissue Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 11 basolateral nucleus of the amygdala Predicted from orthologs Q8CHI5
CT 12 CT 20 DD17 6.25 colon Predicted from orthologs Q8CHI5
ZT 18 ZT 6 LD 2 decidua Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3.5 entral nucleus of the amygdala Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 8 hippocampus Predicted from orthologs Q8CHI5
ZT 9 ZT 0 LD 48 intestinal jejunal mucosa Predicted from orthologs Q8CHI5
CT 12 CT 0 DD17 16.67 liver Predicted from orthologs Q8CHI5
ZT 16 ZT 4 LD >5 mammary gland (pubescent female F344 rats) Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 8 nucleus accumbens core Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 7 nucleus accumbens shell Predicted from orthologs Q8CHI5
CT 20 CT 0 DD1 1.71 PC12 cell Predicted from orthologs Q8CHI5
ZT 0 ZT 16 LD 7.5 prefrontal cortex Predicted from orthologs Q8CHI5
ZT 4 ZT 16 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 20 ZT 8 LD 15 SCN Predicted from orthologs Q8CHI5
ZT 4 ZT 20 LD 3 SCN Predicted from orthologs Q8CHI5
ZT 8 ZT 0 LD 4.76 uteri Predicted from orthologs Q8CHI5
ZT 8 ZT 20 LD 7 ventral tegmental area Predicted from orthologs Q8CHI5
Descriptionhypothetical protein(View all)
Protein Sequence
(Fasta)
MEMILQDTSV FTTYNASAHS VKSDWSPFKT LLLKDLANHQ IDDNFTFEWE ADNGEKSTWN 60
QTMIFFTVKH WKFAKAASAF ENFGLDQDNP NDLVQVGIMT RWVIGRIEEI KRRFRDPSKV 120
EQRTRSKKRR DLWKYRKATL QQHLPQFLDL LPDADCCSDT EDDPHRPIQK SICPAWRSVK 180
YGNWLHEVDR LSYQDQSTIK LRIHPARRLD TRRQEGHTVN PFGTVCANLP ENCYESAFLK 240
HYDPLEKLAL GISPSSAKLD DALTAIATLL PN 272
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-EqC-020994Equus caballus28.81 1.51e-01 33.5
CGD-OvA-022197Ovis aries26.76 1.85e-01 33.11
CGD-RaN-021793Rattus norvegicus28.81 5.05e-01 31.96