CGDB Gene Information
| Tag | Content | |||||||||||||||||||||||||||||||||||||||
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| CGDB ID | CGD-LeO-033639 | |||||||||||||||||||||||||||||||||||||||
| Ensembl Accession | ENSLOCP00000016463.1 | |||||||||||||||||||||||||||||||||||||||
| Protein Name | per1a | |||||||||||||||||||||||||||||||||||||||
| Ensembl Information | ENSLOCG00000013344; ENSLOCT00000016493 | |||||||||||||||||||||||||||||||||||||||
| Organism | Lepisosteus oculatus | |||||||||||||||||||||||||||||||||||||||
| NCBI Taxa ID | 7918 | |||||||||||||||||||||||||||||||||||||||
| Circadian Information |
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| Description | period circadian clock 1a [Source:ZFIN;Acc:ZDB-GENE-011220-1](View all) | |||||||||||||||||||||||||||||||||||||||
| Protein Sequence (Fasta) |
MSDDNSDSAP SHADDVHGVG VSGEGAGPRA GSPGLSGGSE TNSRSNSSSP LGGGGGANSP 60 GGGPGGRGSR APRIQGKGPP QGPQGSSDDM DAHSNGNSSG NDSAVLENES QGRQSTRSSQ 120 SSSSHNCKDS GVLLETTESN KSSNSQSPSP PSSSIAYSLL SASSEQDHPS TSGCSSDQSA 180 RVKTQKELMT ALKELKIRVP AERRGKGRSS TLAALQYALT CVKQVRANQE YYHQWTVDEG 240 QNCSLDLSNY TIEELENITS EYTLKNTDTF SVAVSFITGK VVYVSPQAAC ILRCKPERLQ 300 GALFSKLLAP QDVSVFYSNT VPCRLPAWSA CNGTATSPLD CTQEKSMFCR LSGGREREGE 360 LRYYPFRLTP YQLTLRDSDQ AEPQPCCLLI AERVHSGYEA PRIPPDKRIF TTSHTPSCLF 420 QEVDERAVPL LGYLPQDLVG TPVLLYLHPE DRPAMVAVHK KILQLAGQPL DHSAMRVCAR 480 SGEYLTIDTS WSSFINPWSR KVAFIIGRHK VRTSPLNEDV FTPPLNGEVR SLVPEIHELS 540 SRIHRLLLQP VHATGSLGYC SVGSNGSHEH YLSIASSSDS NGAPADETLL HKPMTFQQIC 600 KDVHMVKNHG QQVFIESRSK PLPQKHASAG PVLPTASSAA VRPAGEVAKE AASAQRSSAP 660 EEAVKKDSPS PYSYQQINCL DSIIRYLESC NIPNTVKRKC GSSSCTASST SDDDKQKPGE 720 EASDMNKGAT VSLGPVGGPK GGPQGPAHPL TPLALHSKAE SVVSITSQCS FSSTIVHVGD 780 KKPPESDIVM MEEAPPTPAP PPPLTTPVAP PPDKDPKDPW RRVGLTKEVL SVHTQKEEQA 840 FLNRFRDLSQ LRVFEPPTQA ERRHSGVPHT RGVRSSRDYP AGGSSGRRGT GRGSRSKAKR 900 LKHQEPSEHG SSVGIGGVFP ASSRATTTLS PPHLPLGPPT SSSSWPTSIG SQASLPPLPY 960 HPGVLPAYPI SVYPPTPRPP QGPPDPQSLP PGFPGAQPTG LRYSPPQNPA PMPAPPPLVT 1020 PMVAFVLPNY MFPQLNAPVL PQPFFNPTSI FPFPAASAPT ALLPQNLGPP PQLQATTPSQ 1080 EPLRAPSRSS TPQSSSPPLP DREGSQTPLF QSRCSSPLNL LQLEESSSNR QEVTSLAVAA 1140 AQAQQTTPTG GVATQEWAEP QGGSGGLASP TQLSTSGDRK DNENVEAIES SNQDAMSTSS 1200 DLLDLLLQED SRSGTGSAAS GSGSSGSGSH GCSTSGSGTR SSQSSHTSKY FGSVDSSEND 1260 LAGKKQAGLA AESEQFIKYV LQDPIWLLMA NTDEKVMMTY QLATRDPETV LREDREALRA 1320 MQKQQPRFSE EQKRELSEVH PWIRTGRLPR AINIPACVGC GSSPPCPGLA PPFDVELHEM 1380 ELGGVPGSPE DPASKTLSAP ETAMEEEAGP APAPHANDQE MASEEQEVTS QGGKAASTAV 1440 TDMTP 1445 |
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| Nucleotide Sequence (Fasta) |
GAGGATTCCC TCAGTCGGGA ATCTTGTAGG TCCCCCCTCT GGAGAAAGAT CGGATCTACT 60 CAGAACAAAT TCCAGAATTA GGGGAACAAA GACCTTGAAA AAGGAAGATA AAGAGGCCTG 120 AAAAAAGAGA GGATCCATAT TTTGATCAAT TCCTCTGCCC ATTCTGCAGA GTTCTGCACC 180 CTCCAGCTCT CTGTCTCTTT CTCACTCCAT CTGGCATTGC GATCCGCTGC CAGATTGAAG 240 GTTTTCAGTT TCCCGGAGAC AGCCGAGTTT TTGTTGCTCT AGTGTCAAGT TTCGCAAGTA 300 TTTTAAGTTT CTCCAGATCC ATTTTCATAT TTATCAATTT AAAATTCAAA CTCTGCAATG 360 GTTCACTCCG GTGGACAAGA CTGCCCCACC TAGTGTGGAA GCAGAGGTAC TGCCACCCTT 420 TGATTTATTC ATCGCTATTC TTAGTATTAT TATGAGTGAT GACAATTCTG ACTCCGCCCC 480 CAGCCATGCT GATGATGTGC ACGGGGTGGG TGTGTCCGGG GAGGGGGCGG GGCCCAGGGC 540 GGGCTCTCCT GGCTTGAGTG GCGGCTCAGA GACCAACAGC CGGAGCAACA GCAGCAGCCC 600 ACTTGGAGGT GGGGGAGGAG CCAACAGCCC TGGGGGCGGT CCCGGGGGGC GGGGCTCAAG 660 AGCCCCTAGG ATCCAGGGAA AAGGGCCCCC GCAGGGCCCC CAGGGCTCCT CAGATGATAT 720 GGACGCCCAC AGCAATGGGA ACTCCAGTGG GAACGACTCT GCTGTGCTGG AGAATGAGTC 780 GCAGGGGAGG CAATCCACCA GGAGCTCTCA GAGTAGCTCC AGCCACAACT GCAAGGACTC 840 TGGCGTGTTA CTGGAGACCA CAGAGAGCAA TAAGAGCTCA AACTCCCAGA GCCCCTCGCC 900 TCCCAGCAGC TCCATCGCGT ACAGCCTGCT GAGCGCCAGC TCCGAGCAGG ACCACCCCTC 960 CACCAGTGGC TGCAGCTCGG ACCAGTCCGC GCGGGTGAAG ACCCAGAAGG AGCTGATGAC 1020 GGCCCTGAAG GAGCTGAAGA TCCGCGTGCC GGCGGAGCGG CGGGGGAAGG GGCGCTCCAG 1080 CACGCTGGCC GCGCTGCAGT ACGCCCTCAC CTGCGTCAAG CAAGTCCGAG CCAACCAGGA 1140 GTACTACCAC CAGTGGACAG TGGACGAGGG TCAGAACTGC AGCCTGGACC TGTCAAACTA 1200 CACCATCGAG GAGCTGGAGA ACATCACCTC CGAGTACACC CTCAAGAACA CTGACACATT 1260 CTCGGTGGCC GTGTCCTTCA TCACGGGGAA GGTGGTGTAT GTCTCCCCCC AGGCGGCCTG 1320 TATCCTGCGC TGCAAACCTG AGCGCCTGCA GGGGGCGCTT TTCTCCAAGC TGCTGGCCCC 1380 CCAGGATGTC AGCGTGTTCT ACAGCAACAC CGTGCCCTGC CGCCTGCCCG CCTGGTCTGC 1440 CTGTAATGGC ACAGCTACCT CACCCCTGGA TTGCACCCAG GAGAAATCCA TGTTCTGTCG 1500 TCTCAGTGGG GGCCGGGAGA GGGAGGGAGA GCTGCGGTAC TACCCCTTCC GACTGACGCC 1560 CTACCAGCTG ACCCTGCGCG ACAGCGACCA AGCCGAGCCC CAGCCCTGCT GCCTGCTCAT 1620 CGCAGAGCGG GTCCATTCTG GATACGAGGC TCCCCGCATT CCCCCAGACA AGCGAATCTT 1680 CACCACGAGC CACACCCCCA GCTGTCTCTT TCAGGAGGTG GATGAGCGTG CAGTGCCATT 1740 GTTGGGGTAC CTTCCTCAGG ACCTAGTGGG GACCCCAGTT CTGCTGTACC TGCACCCCGA 1800 GGATCGGCCA GCCATGGTGG CTGTTCATAA GAAGATCCTG CAGTTGGCCG GCCAGCCCCT 1860 GGACCACTCC GCCATGCGGG TGTGTGCGCG CAGCGGGGAG TACCTGACCA TCGACACCAG 1920 CTGGTCCAGC TTCATCAACC CCTGGAGCCG CAAGGTGGCC TTCATCATCG GCCGGCACAA 1980 AGTCCGCACG AGCCCCCTGA ACGAGGACGT GTTCACACCG CCCCTCAACG GGGAGGTGCG 2040 GTCGCTGGTC CCCGAGATCC ACGAGCTGAG CAGCCGGATC CACCGGCTCC TCCTGCAGCC 2100 TGTGCACGCC ACCGGCTCTC TGGGCTACTG CAGTGTGGGC AGTAACGGCT CCCATGAGCA 2160 CTACCTCAGC ATCGCCTCGT CCAGCGACAG CAACGGGGCG CCCGCCGACG AGACACTGCT 2220 GCACAAGCCG ATGACGTTCC AGCAGATCTG TAAGGACGTG CACATGGTGA AGAACCACGG 2280 CCAGCAGGTC TTCATCGAGT CGCGCAGTAA ACCGCTGCCC CAGAAACACG CCAGCGCAGG 2340 TCCGGTGCTG CCGACGGCTA GCAGCGCGGC AGTGAGGCCA GCTGGGGAGG TGGCCAAGGA 2400 GGCAGCCTCT GCCCAGCGTT CCTCGGCTCC AGAGGAGGCA GTGAAGAAGG ATTCGCCGTC 2460 CCCGTACTCC TACCAGCAGA TCAACTGTCT GGACAGTATT ATCCGGTACC TGGAGAGCTG 2520 CAACATTCCC AACACAGTGA AGAGGAAGTG TGGCTCCTCC TCCTGCACCG CATCATCCAC 2580 CTCCGACGAC GACAAGCAGA AGCCTGGAGA GGAGGCCTCA GACATGAATA AAGGGGCGAC 2640 GGTGTCTCTG GGGCCTGTAG GGGGGCCGAA GGGGGGACCT CAGGGGCCCG CTCACCCCCT 2700 CACGCCCCTG GCGCTGCACA GCAAGGCAGA GAGCGTGGTC TCCATCACCA GCCAGTGCAG 2760 CTTCAGCAGC ACCATTGTCC ACGTGGGCGA CAAGAAACCC CCCGAGTCAG ACATTGTGAT 2820 GATGGAAGAG GCCCCTCCCA CCCCAGCCCC GCCCCCTCCC TTGACCACGC CCGTGGCCCC 2880 GCCCCCGGAT AAGGACCCGA AGGACCCCTG GCGGCGGGTG GGGCTGACCA AGGAGGTCCT 2940 GTCTGTGCAC ACGCAGAAGG AGGAGCAGGC GTTCCTCAAC CGGTTCCGCG ACCTCAGCCA 3000 GCTGCGGGTC TTCGAGCCAC CAACCCAAGC CGAGCGCCGG CACAGCGGGG TGCCCCACAC 3060 GCGAGGGGTG CGCAGTTCCA GGGACTACCC AGCAGGGGGC AGCAGTGGGC GGCGGGGCAC 3120 CGGACGGGGG AGCAGGTCGA AGGCCAAGAG ACTGAAGCAC CAGGAGCCGT CCGAGCACGG 3180 CAGCTCTGTC GGGATCGGGG GGGTCTTCCC AGCATCCAGC AGGGCCACGA CCACCCTGTC 3240 CCCCCCGCAC CTGCCTCTGG GACCCCCGAC TTCGTCCTCG TCCTGGCCCA CTTCCATCGG 3300 CTCCCAGGCC AGCCTGCCCC CCCTTCCCTA CCACCCTGGC GTCCTGCCTG CCTACCCCAT 3360 CTCGGTCTAC CCGCCCACTC CCAGGCCCCC ACAAGGCCCC CCTGACCCCC AAAGCCTTCC 3420 CCCTGGCTTT CCCGGTGCCC AGCCCACTGG CCTCCGCTAT TCCCCTCCCC AGAACCCCGC 3480 CCCCATGCCT GCCCCTCCCC CTCTGGTCAC CCCCATGGTG GCATTTGTGC TGCCCAACTA 3540 CATGTTCCCC CAGCTCAACG CCCCGGTCCT CCCTCAGCCC TTCTTCAACC CCACCTCCAT 3600 CTTCCCCTTC CCAGCTGCCT CCGCCCCCAC AGCCCTCCTG CCCCAGAACC TGGGGCCGCC 3660 CCCCCAGCTG CAGGCCACCA CCCCCTCACA GGAACCCCTG CGGGCCCCCT CTCGCTCCAG 3720 CACCCCGCAG TCCTCCAGCC CCCCCCTCCC CGACCGCGAG GGCTCCCAGA CACCCCTCTT 3780 CCAGTCCCGT TGCTCCTCCC CACTCAACTT ACTTCAGCTA GAAGAGTCTT CCAGTAACCG 3840 ACAGGAAGTG ACTTCGTTGG CCGTGGCCGC CGCCCAGGCC CAGCAGACCA CACCCACAGG 3900 GGGAGTGGCT ACACAGGAGT GGGCGGAGCC GCAGGGAGGG AGTGGAGGTT TGGCCTCACC 3960 CACTCAGCTC AGCACATCGG GGGACAGAAA AGACAATGAA AACGTTGAGG CCATTGAGTC 4020 ATCTAATCAG GATGCCATGT CAACTTCCAG TGACCTGCTG GATCTGCTTC TGCAGGAGGA 4080 TTCCCGATCA GGCACTGGCT CGGCCGCCTC TGGCTCAGGG TCCTCGGGCT CTGGGTCCCA 4140 CGGCTGCAGC ACATCAGGCA GTGGGACCAG AAGCAGTCAG AGCAGCCACA CCAGCAAGTA 4200 CTTCGGCAGC GTGGACTCCT CGGAGAACGA CCTGGCGGGC AAGAAGCAGG CGGGGCTGGC 4260 GGCGGAGAGC GAGCAGTTCA TCAAGTACGT CCTGCAGGAC CCCATCTGGT TGCTGATGGC 4320 CAACACCGAC GAGAAGGTCA TGATGACCTA CCAGCTGGCC ACCCGGGACC CGGAGACCGT 4380 GCTGCGGGAG GACCGGGAGG CCCTGCGCGC CATGCAGAAG CAACAGCCGC GCTTCAGCGA 4440 GGAGCAGAAG AGGGAGCTGA GCGAGGTGCA CCCTTGGATC AGGACCGGCC GGCTGCCCAG 4500 GGCCATCAAC ATCCCGGCAT GTGTGGGGTG CGGCTCGTCC CCTCCGTGCC CGGGCCTGGC 4560 GCCGCCCTTC GACGTGGAGC TGCACGAGAT GGAGCTCGGC GGCGTGCCGG GGTCGCCCGA 4620 GGATCCCGCC AGCAAGACGC TCTCTGCCCC CGAGACGGCC ATGGAGGAGG AGGCAGGACC 4680 CGCCCCCGCC CCCCACGCCA ATGACCAGGA GATGGCCTCG GAGGAACAGG AAGTGACATC 4740 GCAGGGAGGC AAGGCAGCGA GCACAGCAGT GACAGACATG ACGCCATGA 4789 |
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| Sequence Source | Ensembl | |||||||||||||||||||||||||||||||||||||||
| Orthology |
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| Gene Ontology | GO:0005515--protein binding |
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