CGDB Gene Information


Tag Content
CGDB ID CGD-AiM-028497
Ensembl Accession ENSAMEP00000019043.1
Ensembl Information ENSAMEG00000018029; ENSAMET00000019804
Organism Ailuropoda melanoleuca
NCBI Taxa ID 9646
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 15 ZT 3 LD 2 blood Predicted from orthologs P56645
CT 16 CT 4 DD2 2.7 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 4 ZT 21 LD 3.5 human HaCaT keratinocytes Predicted from orthologs P56645
ZT 8 ZT 0 LD 4.6 brown adipose tissue Predicted from orthologs O70361
ZT 8 ZT 0 LD 2.46 epididymal white adipose tissue Predicted from orthologs O70361
ZT 12 ZT 0 LD 10 femur vertebra Predicted from orthologs O70361
ZT 8 ZT 4 LD 5.2 heart Predicted from orthologs O70361
ZT 12 ZT 0 LD 35 jejunum Predicted from orthologs O70361
CT 9 CT 21 DD1 2 SCN Predicted from orthologs O70361
ZT 8 ZT 16 LD 2.5 SCN Predicted from orthologs O70361
CT 15 CT 3 DD1 2 testis Predicted from orthologs O70361
CT 15 CT 3 DD1 4 liver Predicted from orthologs O70361
ZT 8 ZT 0 LD 14 lumbar vertebra Predicted from orthologs O70361
CT 0 CT 12 DD2 8.8 NIH-3T3 cells Predicted from orthologs O70361
ZT 8 ZT 0 LD 23 liver Predicted from orthologs O70361
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Protein Sequence
(Fasta)
SEELLMVVQE MKKYFPSGRH SKPSTVDALN YALCCIHSVQ ANSEFFQTLS QRGAPCAAAT 60
AYGLEELATA ALGYASKNPE TFVAVFSFLS GRLVHISEQA TSVPNFLESS HFVELLAPQD 120
VRVFCAHTGP AQLPAWNPKS QAASQYEFAP VKSFFCRIRG GQDTEQEKHY CPFWIIRSVM 180
HVHRSPQPES EPCCLPLVGR IHSGYEAPRI PVDKRIFTTT HTPGCVFLET DERAGPLLGY 240
LRQDLMGTSV LAFLHPEDRS LMLAVHQKVS KYAGHPPFEH SSIRFCTQNG DDVILDSSWS 300
SFVSPSWKVS FIMGGHKLRR SPLNEDVFAT RKRKANSNDK DITELQEQIH RLLLQPVPAS 360
AASGYGSWAA SRRPTSSSSS VRKNVCKKKI PPSEVLFPAW TLQQVYASVN KIKNPGQQLY 420
IESVAKS 427
Nucleotide Sequence
(Fasta)
TCTGAAGAAC TTCTAATGGT TGTGCAAGAA ATGAAAAAAT ACTTCCCATC AGGGAGACAC 60
AGTAAGCCAA GCACCGTCGA TGCCCTCAAC TATGCCCTTT GCTGCATACA CAGTGTACAA 120
GCAAACAGTG AGTTTTTCCA GACTCTCAGT CAGCGTGGAG CACCTTGCGC AGCTGCGACC 180
GCGTACGGCC TCGAGGAGCT GGCCACGGCT GCTTTGGGGT ACGCTTCCAA AAACCCAGAG 240
ACCTTTGTGG CAGTGTTTTC ATTTCTGTCT GGAAGGTTAG TGCACATTTC TGAACAGGCT 300
ACTTCAGTCC CGAATTTCTT GGAGTCTTCT CACTTTGTGG AACTGCTTGC TCCTCAAGAT 360
GTGAGGGTGT TCTGTGCACA CACTGGCCCC GCTCAGCTTC CCGCCTGGAA CCCAAAGAGT 420
CAAGCAGCAT CTCAGTACGA ATTCGCTCCG GTGAAATCCT TTTTCTGCAG GATCCGGGGA 480
GGCCAAGACA CAGAGCAAGA GAAGCATTAC TGCCCATTCT GGATTATCCG CTCTGTGATG 540
CACGTGCATC GCTCTCCCCA GCCGGAATCT GAGCCCTGCT GCCTCCCGCT GGTGGGGAGG 600
ATTCACTCTG GTTATGAAGC TCCTCGAATC CCGGTGGATA AAAGAATTTT CACCACGACA 660
CACACCCCAG GGTGTGTCTT TCTTGAAACA GATGAAAGAG CGGGGCCTCT GCTGGGTTAC 720
CTACGTCAGG ATCTGATGGG AACGTCTGTC TTGGCGTTTC TGCACCCAGA AGATCGTTCT 780
CTCATGCTCG CTGTACACCA GAAAGTCTCA AAGTACGCAG GCCACCCTCC CTTTGAACAC 840
TCATCCATTC GATTTTGTAC TCAAAACGGA GATGACGTCA TCCTGGACTC CAGCTGGTCC 900
AGCTTTGTGA GCCCGAGCTG GAAGGTGTCT TTCATCATGG GTGGGCATAA ACTAAGGAGG 960
AGTCCACTGA ATGAGGATGT TTTTGCTACC AGAAAGAGAA AGGCCAACAG TAATGACAAA 1020
GACATAACAG AATTACAAGA ACAAATTCAC AGACTCCTCT TACAGCCGGT TCCCGCGAGC 1080
GCCGCCAGCG GCTATGGAAG CTGGGCAGCC TCGCGTCGTC CAACATCCTC ATCCAGTTCG 1140
GTGCGGAAAA ATGTCTGTAA AAAGAAAATA CCACCCTCGG AAGTTCTTTT CCCTGCGTGG 1200
ACTTTGCAGC AGGTGTATGC CAGTGTAAAC AAAATTAAGA ATCCGGGTCA GCAGCTCTAC 1260
ATTGAGTCAG TGGCCAAGTC A 1281
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-HoS-021431Homo sapiens (Human)64.75 3.00e-150 529.6
CGD-MuM-021078Mus musculus (Mouse)64.35 2.00e-150 529.6
CGD-RaN-021797Rattus norvegicus65.51 1.00e-153 539.7
Gene Ontology

GO:0005515--protein binding
GO:0032922--circadian regulation of gene expression