CGDB Gene Information


Tag Content
CGDB ID CGD-MuM-021794
Uniprot Accession Q8CHR1; Q8CHR1; Q8CHR1_MOUSE
Protein Name Per1 protein
Gene Name Per1
Ensembl Information ENSMUST00000102605; ENSMUSP000000996
Organism Mus musculus (Mouse)
NCBI Taxa ID 10090
Circadian Information
Evidence Phase Amplitude
(FOLD)
Sentence Tissue/Cell Data type PMID
Peak Trough External
condition
Small-scale ZT 12 ZT 0 LD 18.00 Negative regulators for the BMAL-CLOCK heterodimer (such as Per1, Per2, Per3, Cry1 and Cry2) had a similar expression pattern, i.e. a peak at early/mid-dark phase (Per1, Per3 and Cry2 at 19:00, or Per2 and Cry1 at 23:00) in jejunum of mice. jejunum Small-scale [1]
Small-scale CT 12 CT 0 DD3 100.00 Per1 exhibited clear circadian expression in mouse liver. liver Small-scale [1]
Small-scale ZT 12 ZT 4 LD 20.00 The expression of Per1 is cyclic in liver of C57/Black6 mice. liver Small-scale [1]
Small-scale ZT 12 ZT 4 LD 3.00 The expression of Per1 is cyclic in liver of C57/Black6 mice. pituitary gland Small-scale [1]
Protein Sequence
(Fasta)
MSGPLEGADG GGDPRPGEPF CPGGVPSPGA PQHRPCPGPS LADDTDANSN GSSGNESNGP 60
ESRGASQRSS HSSSSGNGKD SALLETTESS KSTNSQSPSP PSSSIAYSLL SASSEQDNPS 120
TSGCSSEQSA RARTQKELMT ALRELKLRLP PERRGKGRSG TLATLQYALA CVKQVQANQE 180
YYQQWSLEEG EPCAMDMSTY TLEELEHITS EYTLRNQAGV LLRCKRDVFR GARFSELLAP 240
QDVGVFYGST TPSRLPTWGT GTSAGSGLKD FTQEKSVFCR IRGGPDRDPG PRYQPFRLTP 300
YVTKIRVSDG APAQPCCLLI AERIHSGYEA PRIPPDKRIF TTRHTPSCLF QDVDERAAPL 360
LGYLPQDLLG APVLLFLHPE DRPLMLAIHK KILQLAGQPF DHSPIRFCAR NGEYVTMDTS 420
WAGFVHPWSR KVAFVLGRHK VRTAPLNEDV FTPPAPSPAP SLDSDIQELS EQIHRLLLQP 480
VHSSSPTGLC GVGPLMSPGP LHSPGSSSDS NGGDAEGPGP PAPVTFQQIC KDVHLVKHQG 540
QQLFIESRAK PPPRPRLLAT GTFKAKVLPC QSPNPELEVA PVPDQASLAL APEEPERKET 600
SGCSYQQINC LDSILRYLES CNIPSTTKRK CASSSSYTAS SASDDDKQRA GPVPVGAKKD 660
PSSAMLSGEG ATPRKEPVVG GTLSPLALAN KAESVVSVTS QCSFSSTIVH VGDKKPPESD 720
IIMMEDLPGL APGPAPSPAP SPTVAPDPTP DAYRPVGLTK AVLSLHTQKE EQAFLNRFRD 780
LGRLRGLDTS SVAPSAPGCH HGPIPPGRRH HCRSKAKRSR HHHHQTPRPE TPCYVSHPSP 840
VPSSGPWPPP PATTPFPAMV QPYPLPVFSP RGGPQPLPPA PTSVSPATFP SPLVTPMVAL 900
VLPNYLFPTP PSYPYGVSQA PVEGPPTPAS HSPSPSLPPP PLSPPHRPDS PLFNSRCSSP 960
LQLNLLQLEE SPRTEGGAAA GGPGSSAGPL PPSEETAEPE ARLVEVTESS NQDALSGSSD 1020
LLELLLQEDS RSGTGSAASG SLGSGLGSGS GSGSHEGGST SASITRSSQS SHTSKYFGSI 1080
DSSEAEAGAA RARTEPGDQV IKCVLQDPIW LLMANADQRV MMTYQVPSRD AASVLKQDRE 1140
RLRAMQKQQP RFSEDQRREL GAVHSWVRKG QLPRALDVTA CVDCGSSVQD PGHSDDPLFS 1200
ELDGLGLEPM EEGGGEGGGC GVGGGGGDGG EEAQTQIGAK GSSSQDSAME EEEQGGGSSS 1260
PALPAEENST S 1271
Sequence Source Uniprot/ENA
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-HoS-051937Homo sapiens (Human)61.76 0.00e+00 1463.4
CGD-MaE-058204Macropus eugenii49.67 5.00e-139 493.8
CGD-PaA-057182Papio anubis56.32 0.00e+00 929.5
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000014--PAS
IPR013655--PAS_fold_3
IPR022728--Period_circadian-like_C

PROSITE

PS50112--PAS

Pfam

PF08447--PAS_3
PF12114--Period_C

SMART

SM00091--PAS