CGDB Gene Information


Tag Content
CGDB ID CGD-MaM-036963
Ensembl Accession ENSMMUP00000024419.2
Ensembl Information ENSMMUG00000018562; ENSMMUT00000026096
Organism Macaca mulatta
NCBI Taxa ID 9544
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
ZT 1 ZT 14 LD 8 human hair follicle cells Predicted from orthologs Q8TAR6
ZT 6 ZT 18 LD 4 muscle Predicted from orthologs W5PL09
ZT 12 ZT 0 LD 25 abdominal adipose tissue Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 2.3 basolateral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 12 ZT 0 LD 5 entral nucleus of the amygdala Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 4.5 hippocampus Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 14 nucleus accumbens core Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 5 nucleus accumbens shell Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 8 prefrontal cortex Predicted from orthologs Q8CJE2
ZT 0 ZT 12 LD 6 SCN Predicted from orthologs Q8CJE2
ZT 4 ZT 16 LD 2 ventral tegmental area Predicted from orthologs Q8CJE2
Protein Sequence
(Fasta)
MEPRGDLETP RGEPPGTGGR GAEDEALGEE SGERWSPEFH LQRKLAESSH SEQQDRNRVS 60
EELIMVVQEM KKYFPSERRN KPSTLDALNY ALRCVHSVQA NGEFFQILSQ NGAPQADVTM 120
YSLEELATIA SEHTSKNTDT FVAVFSFLSG RLVHVSEQAA LILNRKKDVL ASSHFVDLLA 180
PQDVRVFYAH TARAQLPFWN NWTQRAPRYE CAPVKPFFCR IRGGEDRKQE KRHSPFRIIP 240
YLIYVHRPGQ PESESEPCCL TVVEKIHSGY EAPRIPVNKR IFTTTHTPGC VFLEVDERAV 300
PLLGYLPQDL IGTSILSYLH PEDRSLMVAI HQKVLKYAGH PPFEHSPIRF CTQNGDYIIL 360
DSSWSSFVNP WSRKVSFIIG RHKVRT 386
Nucleotide Sequence
(Fasta)
GCGCGCGGGC GGCCCCGAGG GCGAGCTGCT GCGCGCGGGG CCGAGGGCGG GGGCAGCCGG 60
CCGGACTTCT GAAAGTCGAA CGAGCTCCGG GTTTTGGAAA TGCTGGAGGG AGAAGCCCCT 120
CGGAGATGAG CGTGACCCCC TGGCTCGTGG TGGCCGCCTC TTACGCCATG GCGCGGACCA 180
GAGTGAGAAA CCGGTGTCTG TTGCCGACTG CAAAGTGAGC GAGAAGAAAG CAGCGGGTTG 240
TCCCAGCCCT ACATGGAGCC CCGCGGAGAC CTCGAGACGC CCCGCGGGGA ACCTCCTGGC 300
ACCGGGGGAC GGGGGGCTGA GGACGAGGCC CTGGGCGAAG AATCGGGGGA GCGGTGGAGC 360
CCCGAGTTCC ATCTGCAAAG GAAATTGGCG GAGAGCAGCC ACAGTGAACA GCAAGATCGA 420
AACAGAGTTT CTGAAGAACT TATCATGGTT GTCCAAGAAA TGAAAAAATA CTTCCCCTCG 480
GAGAGACGCA ATAAACCAAG CACTCTAGAT GCCCTCAACT ATGCTCTCCG CTGTGTCCAC 540
AGCGTGCAAG CAAACGGTGA GTTTTTCCAG ATTCTCAGTC AAAATGGAGC ACCTCAGGCA 600
GATGTGACCA TGTACAGTCT TGAGGAGCTG GCCACTATTG CTTCAGAACA CACTTCCAAA 660
AACACAGATA CCTTTGTGGC AGTATTTTCA TTTCTGTCTG GAAGGTTAGT GCACGTTTCT 720
GAACAGGCTG CTTTGATCCT GAATCGTAAG AAAGATGTCC TGGCGTCTTC TCACTTTGTT 780
GACCTGCTTG CCCCTCAAGA CGTGAGGGTA TTCTACGCGC ACACTGCCAG AGCTCAGCTT 840
CCCTTCTGGA ACAACTGGAC CCAAAGAGCT CCACGGTATG AATGTGCTCC AGTGAAACCT 900
TTTTTCTGCA GGATCCGTGG AGGTGAAGAC AGAAAGCAAG AGAAGCGTCA CTCCCCATTC 960
CGGATCATCC CCTATCTGAT TTATGTACAT CGCCCTGGCC AGCCAGAATC GGAATCGGAA 1020
CCTTGCTGTC TCACTGTGGT TGAAAAGATT CACTCTGGTT ATGAAGCTCC TCGAATCCCA 1080
GTGAATAAAA GAATCTTTAC CACAACACAC ACCCCAGGGT GTGTTTTTCT TGAAGTAGAT 1140
GAAAGAGCAG TGCCTTTGCT GGGTTACCTA CCTCAGGACC TGATCGGAAC ATCGATCCTA 1200
AGCTACCTGC ACCCTGAAGA TCGTTCTCTG ATGGTTGCCA TACACCAAAA AGTCTTGAAG 1260
TATGCAGGGC ATCCTCCCTT TGAGCATTCT CCCATTCGAT TTTGTACTCA AAATGGAGAC 1320
TACATCATAC TGGATTCCAG CTGGTCCAGC TTTGTGAATC CCTGGAGCCG GAAGGTTTCT 1380
TTCATCATTG GTCGGCATAA AGTTCGAACG TAAGCCAGTC AGTTTTCATA TTTTCTAAAA 1440
CATCTCCTGT ATCAAATAAT ATTCCTTAGC TTATTGACTG CTCTCTGACT TAGTTGACAC 1500
ATGAACTAAA TAAAGC 1516
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-HoS-021860Homo sapiens (Human)96.16 0.00e+00 724.2
CGD-OvA-022195Ovis aries75.21 3.00e-157 551.6
CGD-RaN-021797Rattus norvegicus82.66 1.00e-170 596.3
Gene Ontology

GO:0032922--circadian regulation of gene expression
GO:0005515--protein binding