CGDB Gene Information


Tag Content
CGDB ID CGD-BrD-058480
Ensembl Accession BRADI1G60080.1
Ensembl Information BRADI1G60080; BRADI1G60080.1
Organism Brachypodium distachyon
NCBI Taxa ID 15368
Circadian Information
Phase Amplitude
(FOLD)
Tissue/Cell Evidence
Peak Trough External
condition
CT 4 CT 12 DD2 27 aortic smooth muscle cells Predicted from orthologs O15055
ZT 4 ZT 21 LD 5 human HaCaT keratinocytes Predicted from orthologs O15055
ZT 1 ZT 19 LD 2.67 human hair follicle cells Predicted from orthologs O15055
CT 12 CT 0 LL1 3.43 oral mucosa Predicted from orthologs O15055
CT 3 CT 15 DD2 5 U2OS cells Predicted from orthologs O15055
Protein Sequence
(Fasta)
MDGATATATD AGRPLPRGSS CDVRNRQENY KENTSYQRSN DIRAHKERQS EWTKPGRVFN 60
RNISRGGYSR SSFSGVTQEF RVVKDNRIKQ KADGDTVPGS FHNGDSSSEH TVTNIGDKSS 120
TEKLSDGHGT TQADNGHKVA AQAHGKEVKL SSDQRLEQSE RMRTPLVGSH ALQEKGKQNK 180
ELAAPSVTNN FTQELCCSSS DPIHVPPPGS RPVGTFGAIK REVGVVGARQ RPSDIAATNI 240
STSNSLATVT MVMKDNASSE HQSRLSVVPS KTSHSSSSVS LSSRPFLPSQ VYSKPSIHVG 300
HSKGNPHLEW KPKSVRPTSV NCAANVAPSS ATSSADVHQV GMACLSKKLS QANVSKDERV 360
IMPEHLKVPD NERTHLIFGT FESEAKSNAS TSSPIATSKE GLDVHSSTRL TPLNSVRSSD 420
EVRPGDQTDH VGSCATLPQS DVLSFSEHQQ SSIVDIGPSP GVIGEYRTNE MISNKIAHSV 480
PQPQYQDNYA VQNFKAYEPD SKYEMPFITK SIDGETVQTR SYPSEIMGLH PSNVNQLSVS 540
SASQQPVPQM YQQVQVPQYP SFLPYRHVFS PYYVPPVAVP NYSSNPSFPQ LPHASNYLVM 600
PNGASHEIGS MKFGTPHQYK QVFPGSPAGY GSYANQSGYP VSNCIIGSTG AVEDASMSKY 660
KDNNNMYTPN QQAETTDLWI QAHRDIPSMP TTPFYNMMGR PMSPHTAYLP AHNGHAPFNP 720
APHPAHLQFP GLPHPLQPTS MTMVQNPQSM VHQPAGNMGI DMAAMAPGAQ AGAFPGAQVG 780
AFQQNQLGHL GWAPPNY 797
Sequence Source Ensembl
Orthology
CGDB IDSpieces IdentityE-ValueScore
CGD-HoS-021036Homo sapiens (Human)23.45 1.36e-01 36.96