CGDB Gene Information

Tag Content
CGDB ID CGD-MuM-014711
Uniprot Accession Q542Q5; Q542Q5; Q542Q5_MOUSE
Protein Name DNA segment, human D4S114, isoform CRA_a
Gene Name Nrep; D0H4S114; Harp; mCG_119971
Genbank Protein ID NP_001103458.1; NP_001103459.1; NP_001254646.1; NP_444308.1
Genbank Nucleotide ID NM_001109988.1; NM_001109989.2; NM_001267717.1; NM_053078.4
Organism Mus musculus (Mouse)
NCBI Taxa ID 10090
Circadian Information
Evidence Phase Amplitude
(FOLD)		 Sentence Tissue/Cell Data type PMID
Peak Trough External
condition
High-throughput CT 14 CT 4 DD2 7.86 Identified over 3,000 different transcripts in the mouse liver that cycle with a period length of approximately 24 hours. liver Microarray [1]
High-throughput ZT 14 ZT 2 LD 3.31 It is specifically the nutritional challenge, and not the development of obesity, that causes the reprogramming of the clock and the effects of diet on the clock are reversible. liver Microarray [1]
High-throughput CT 17 CT 5 DD2 7.50 Robust transcript oscillations often accompanied rhythms in multiple histone modifications and recruitment of multiple chromatin-associated clock components.? liver RNA-seq [1]
High-throughput CT 15 CT 3 DD1 5.69 CLOCK-dependent direct transactivation through multiple E-boxes and indirect regulations polyphonically orchestrate dynamic circadian outputs. liver RNA-seq [1]
High-throughput ZT 13 ZT 1 LD 3.73 The dynamics of translational regulation, circadian gene expression, and metabolic control in a solid mammalian organ. liver RNA-seq [1]
Protein Sequence
(Fasta)		 MVYYPELLVW VSQEPFAYKE MEGGLIKGRL PVPKEVNRKK MEETGAASLT PPGSREFTSP 60
ATSYLHPF 68
Sequence Source Uniprot/ENA
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0031103--P:axon regeneration
GO:0045664--P:regulation of neuron differentiation
Interpro

IPR024417--Neuronal_3
1--
Pfam

PF11092--Alveol-reg_P311