| Tag |
Content |
| CGDB ID |
CGD-MuM-011351 |
| Uniprot Accession |
A6H669; A6H669; A6H669_MOUSE
|
| Protein Name |
Bardet-Biedl syndrome 4 (Human) |
| Gene Name |
Bbs4; mCG_22638 |
| Genbank Protein ID |
NP_780534.1 |
| Genbank Nucleotide ID |
NM_175325.3 |
| Organism |
Mus musculus (Mouse) |
| NCBI Taxa ID |
10090 |
Circadian Information
|
| Evidence |
Phase |
Amplitude
(FOLD) |
Sentence |
Tissue/Cell |
Data type |
PMID |
| Peak |
Trough |
External
condition |
| High-throughput |
ZT 22 |
ZT 10 |
LD |
2.58 |
This study provides an important chronobiological resource (www.wgpembroke.com/shiny/SCNseq/) and allows us to propose that transcriptional timing in the SCN is gating clock resetting mechanisms. |
SCN |
RNA-seq |
[1] |
|
Protein Sequence
(Fasta) |
MAEVKLGMKT QVPASVESQK PRSKKAPDFP IVEKQNWLIH LHYIRKDYEA CKAVIKEQLQ 60
ETQGLCEYAI YVQALIFRLE GNIQESLELF QTCAVLSPQC ADNLKQVARS LFLLGKHKAA 120
TEVYNEAAKL NQKDWEICHN LGVCYTYLKQ FNKAQDQLHS ALQLNKHDLT YIMLGKIHLL 180
QGDLDKAIEI YKKAVEFSPE NTELLTTLGL LYLQLGVYQK AFEHLGNALT YDPANYKAIL 240
AAGSMMQTHG DFDVALTKYR VVACAIPESP PLWNNIGMCF FGKKKYVAAI SCLKRANYLA 300
PFDWKILYNL GLVHLTMQQY ASAFHFLSAA INFQPKMGEL YMLLAVALTN LEDIENARRA 360
YVEAVRLDKC NPLVNLNYAV LLYNQGEKKS ALAQYQEMEK KVNFLKDNSP LEFDSEMVEM 420
AQKLGAALQV GEALVWTKPV KDPKTKHRTN SGSKSATLQQ PLGSIQALGQ AMSSAAAYRK 480
ILSGAVGAQL PKPPSLPLEP EPEPTVEASP TEASEQKKEK Fasta Sequence
>CGD-MuM-011351|A6H669|Bardet-Biedl syndrome 4 (Human)|Mus musculus (Mouse)
MAEVKLGMKTQVPASVESQKPRSKKAPDFPIVEKQNWLIHLHYIRKDYEACKAVIKEQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQCADNLKQVARSLFLLGKHKAATEVYNEAAKLNQKDWEICHNLGVCYTYLKQFNKAQDQLHSALQLNKHDLTYIMLGKIHLLQGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGVYQKAFEHLGNALTYDPANYKAILAAGSMMQTHGDFDVALTKYRVVACAIPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDIENARRAYVEAVRLDKCNPLVNLNYAVLLYNQGEKKSALAQYQEMEKKVNFLKDNSPLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPKTKHRTNSGSKSATLQQPLGSIQALGQAMSSAAAYRKILSGAVGAQLPKPPSLPLEPEPEPTVEASPTEASEQKKEK |
| Sequence Source |
Uniprot/ENA |
| Keyword |
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
|
| Gene Ontology |
GO:0034464--C:BBSome
GO:0034451--C:centriolar satellite
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0060170--C:ciliary membrane
GO:0035869--C:ciliary transition zone
GO:0031514--C:motile cilium
GO:0005634--C:nucleus
GO:0000242--C:pericentriolar material
GO:0003777--F:microtubule motor activity
GO:0051297--P:centrosome organization
GO:0051457--P:maintenance of protein location in nucleus
GO:0034454--P:microtubule anchoring at centrosome
GO:0000281--P:mitotic cytokinesis
GO:0035058--P:nonmotile primary cilium assembly
GO:0071539--P:protein localization to centrosome
GO:0061512--P:protein localization to cilium
GO:0032465--P:regulation of cytokinesis
|
| Interpro |
IPR028786--BBS4
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
|
| PROSITE |
PS50005--TPR
PS50293--TPR_REGION
|
| Pfam |
PF13414--TPR_11
PF13181--TPR_8
|
